Struct CellOnFileQuality 

pub struct CellOnFileQuality {
    pub cells_to_keep: Vec<usize>,
    pub genes_to_keep: Vec<usize>,
    pub cells_to_keep_set: FxHashSet<usize>,
    pub genes_to_keep_set: FxHashSet<usize>,
    pub cell_old_to_new: FxHashMap<usize, usize>,
    pub gene_old_to_new: FxHashMap<usize, usize>,
}

CellOnFileQuality

This structure is being generate after a first scan of the file on disk and defining which cells and genes to actually read in.

Fields

cells_to_keep: Vec<usize>

Vector of indices of the cells to keep.

genes_to_keep: Vec<usize>

Vector of indices of the genes to keep.

cells_to_keep_set: FxHashSet<usize>

HashSet of the indices to keep (for look-ups).

genes_to_keep_set: FxHashSet<usize>

HashSet of the genes to keep (for look-ups).

cell_old_to_new: FxHashMap<usize, usize>

Mapping of the old indices to the new indices for the cells.

gene_old_to_new: FxHashMap<usize, usize>

Mapping of old indices to new indices for the genes.

Implementations

impl CellOnFileQuality

pub fn new(cells_to_keep: Vec<usize>, genes_to_keep: Vec<usize>) -> Self

Create a new CellOnFileQuality structure

Params

• cells_to_keep - Index positions of the cells to keep
• genes_to_keep - Index positions of the genes to keep

Returns

Initiliased self

pub fn generate_maps_sets(&mut self)

Generate internally the sets and maps

Trait Implementations

impl Clone for CellOnFileQuality

fn clone(&self) -> Self

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for CellOnFileQuality

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.