Enum AlignMode 

pub enum AlignMode {
    Global,
    Semiglobal,
    Blockwise(usize),
}

An align mode, can be either Local for local alignment, global for global alignment, or Blockwise with a given block size. The blockwise mode starts from a given position and aligns only using blocksize bytes from each sequence in one direction, which makes it works fast and local, but it doesn’t see bigger gaps and everything after big gaps tends to be unaligned.

Variants

Global

Align both sequences as a whole, making the ends match up.

Semiglobal

Aligns the first sequence as a subsequence of the second sequence, without penalizing for extra characters in the second sequence.

Blockwise(usize)

Aligns blocks of a given size in both sequences, starting from the given address and extending in both directions until the end of the sequence is reached.

Trait Implementations

impl Clone for AlignMode

fn clone(&self) -> AlignMode

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for AlignMode

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<'de> Deserialize<'de> for AlignMode

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl PartialEq for AlignMode

fn eq(&self, other: &AlignMode) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Serialize for AlignMode

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.

impl Copy for AlignMode

impl Eq for AlignMode

impl StructuralPartialEq for AlignMode