Struct bio_types::genome::Interval

pub struct Interval { /* private fields */ }

Implementations

impl Interval

pub fn new(contig: String, range: Range<Position>) -> Self

Constructs a new Interval.

impl Interval

pub fn range_mut(&mut self) -> &mut Range<Position>

Mutable reference to interval on the contig

Trait Implementations

impl AbstractInterval for Interval

fn contig(&self) -> &str

Identifier for a genomic contig, e.g., a chromosome

fn range(&self) -> Range<Position>

Interval on the contig

fn contains<L>(&self, locus: L) -> bool where
    L: AbstractLocus, 

Return true if interval contains given locus.

impl Clone for Interval

fn clone(&self) -> Interval

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for Interval

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Hash for Interval

fn hash<__H: Hasher>(&self, state: &mut __H)

Feeds this value into the given Hasher.

fn hash_slice<H>(data: &[Self], state: &mut H) where
    H: Hasher, 

Feeds a slice of this type into the given Hasher.

impl Ord for Interval

fn cmp(&self, other: &Self) -> Ordering

This method returns an Ordering between self and other.

fn max(self, other: Self) -> Self

Compares and returns the maximum of two values.

fn min(self, other: Self) -> Self

Compares and returns the minimum of two values.

fn clamp(self, min: Self, max: Self) -> Self

Restrict a value to a certain interval.

impl PartialEq<Interval> for Interval

fn eq(&self, other: &Interval) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Interval) -> bool

This method tests for !=.

impl PartialOrd<Interval> for Interval

fn partial_cmp(&self, other: &Self) -> Option<Ordering>

This method returns an ordering between self and other values if one exists.

fn lt(&self, other: &Rhs) -> bool

This method tests less than (for self and other) and is used by the < operator.

fn le(&self, other: &Rhs) -> bool

This method tests less than or equal to (for self and other) and is used by the <= operator.

fn gt(&self, other: &Rhs) -> bool

This method tests greater than (for self and other) and is used by the > operator.

fn ge(&self, other: &Rhs) -> bool

This method tests greater than or equal to (for self and other) and is used by the >= operator.

impl Eq for Interval

impl StructuralEq for Interval

impl StructuralPartialEq for Interval