List of all items
Structs
- BBIFileInfo
- BBIHeader
- BBIWriteOptions
- BedEntry
- BigBedIntervalIter
- BigBedRead
- BigBedWrite
- BigWigIntervalIter
- BigWigRead
- BigWigWrite
- Block
- CachedBBIFileRead
- ChromInfo
- CirTreeIndex
- ReductionLevelNotFound
- Summary
- Value
- ZoomHeader
- ZoomIntervalIter
- ZoomRecord
- bed::autosql::parse::Declaration
- bed::autosql::parse::DeclareName
- bed::autosql::parse::Field
- bed::bedparser::BedFileStream
- bed::bedparser::BedInfallibleIteratorStream
- bed::bedparser::BedIteratorStream
- beddata::BedParserParallelStreamingIterator
- beddata::BedParserStreamingIterator
- utils::cli::BBIWriteArgs
- utils::cli::bedgraphtobigwig::BedGraphToBigWigArgs
- utils::cli::bedtobigbed::BedToBigBedArgs
- utils::cli::bigbedinfo::BigBedInfoArgs
- utils::cli::bigbedtobed::BigBedToBedArgs
- utils::cli::bigwigaverageoverbed::BigWigAverageOverBedArgs
- utils::cli::bigwiginfo::BigWigInfoArgs
- utils::cli::bigwigmerge::BigWigMergeArgs
- utils::cli::bigwigmerge::ChromGroupReadImpl
- utils::cli::bigwigmerge::MergingValues
- utils::cli::bigwigtobedgraph::BigWigToBedGraphArgs
- utils::cli::bigwigvaluesoverbed::BigWigValuesOverBedArgs
- utils::file::file_view::FileView
- utils::file::remote_file::RemoteFile
- utils::file::reopen::ReopenableFile
- utils::file::streaming_linereader::StreamingLineReader
- utils::file::tempfilebuffer::TempFileBuffer
- utils::file::tempfilebuffer::TempFileBufferWriter
- utils::idmap::IdMap
- utils::misc::BigWigAverageOverBedEntry
- utils::misc::InvalidNameColError
Enums
- BBIFile
- BBIProcessError
- BBIReadError
- BigBedReadOpenError
- BigWigReadOpenError
- CirTreeIndexType
- CirTreeSearchError
- GenericBBIFileOpenError
- GenericBBIRead
- InputSortType
- ProcessDataError
- ZoomIntervalError
- bed::autosql::parse::DeclarationType
- bed::autosql::parse::FieldType
- bed::autosql::parse::IndexType
- bed::autosql::parse::ParseError
- bed::bedparser::BedValueError
- utils::cli::bigwigmerge::MergingValuesError
- utils::misc::BigWigAverageOverBedError
- utils::misc::Name
Traits
- BBIDataProcessor
- BBIDataSource
- BBIFileRead
- BBIRead
- bed::bedparser::StreamingBedValues
- utils::file::reopen::Reopen
- utils::file::reopen::SeekableRead
- utils::file::tell::Tell
Functions
- bed::autosql::bed_autosql
- bed::autosql::parse::parse_autosql
- bed::bedparser::parse_bed
- bed::bedparser::parse_bedgraph
- bed::indexer::index_chroms
- utils::cli::bedgraphtobigwig::bedgraphtobigwig
- utils::cli::bedtobigbed::bedtobigbed
- utils::cli::bigbedinfo::bigbedinfo
- utils::cli::bigbedtobed::bigbedtobed
- utils::cli::bigbedtobed::write_bed
- utils::cli::bigbedtobed::write_bed_from_bed
- utils::cli::bigbedtobed::write_bed_singlethreaded
- utils::cli::bigwigaverageoverbed::bigwigaverageoverbed
- utils::cli::bigwiginfo::bigwiginfo
- utils::cli::bigwigmerge::bigwigmerge
- utils::cli::bigwigmerge::get_merged_vals
- utils::cli::bigwigtobedgraph::bigwigtobedgraph
- utils::cli::bigwigtobedgraph::write_bg
- utils::cli::bigwigtobedgraph::write_bg_from_bed
- utils::cli::bigwigtobedgraph::write_bg_singlethreaded
- utils::cli::bigwigvaluesoverbed::bigwigvaluesoverbed
- utils::cli::compat_args
- utils::file::split_file_into_chunks_by_size
- utils::fill::fill
- utils::fill::fill_start_to_end
- utils::merge::merge_into
- utils::merge::merge_sections_many
- utils::misc::bigwig_average_over_bed
- utils::misc::name_for_bed_item
- utils::misc::stats_for_bed_item