Struct SparseBinnedCoverage 

pub struct SparseBinnedCoverage<'a, N> {
    pub len: usize,
    pub bin_size: u64,
    pub consumed_tags: f64,
    /* private fields */
}

Fields

len: usize

bin_size: u64

consumed_tags: f64

Implementations

impl<'a, N: Num + NumCast + NumAssignOps + Copy> SparseBinnedCoverage<'a, N>

pub fn new(intervals: &'a GIntervalIndexSet, bin_size: u64) -> Self

pub fn len(&self) -> usize

pub fn total_count(&self) -> f64

pub fn reset(&mut self)

pub fn insert<D>(&mut self, tag: &D, count: N)

where D: BEDLike,

pub fn regions( &self, ) -> impl Iterator<Item = impl Iterator<Item = GenomicRange> + '_> + '_

pub fn get_chrom(&self, index: usize) -> Option<&str>

pub fn get_region(&self, index: usize) -> Option<GenomicRange>

pub fn get_coverage(&self) -> &BTreeMap<usize, N>

pub fn get_coverage_as_vec(&self) -> Vec<N>

Trait Implementations

impl<'a, N: Clone> Clone for SparseBinnedCoverage<'a, N>

fn clone(&self) -> SparseBinnedCoverage<'a, N>

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl<'a, N: Debug> Debug for SparseBinnedCoverage<'a, N>

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.