Struct bed_utils::bed::tree::SparseBinnedCoverage

pub struct SparseBinnedCoverage<'a, B, N> {
    pub len: usize,
    pub bin_size: u64,
    pub consumed_tags: f64,
    /* private fields */
}

Fields

len: usize

bin_size: u64

consumed_tags: f64

Implementations

impl<'a, N: Num + NumCast + NumAssignOps + Copy, B: BEDLike> SparseBinnedCoverage<'a, B, N>

pub fn new(genome_regions: &'a GenomeRegions<B>, bin_size: u64) -> Self

pub fn reset(&mut self)

pub fn insert<D>(&mut self, tag: &D, count: N)

where D: BEDLike,

pub fn get_regions( &'a self ) -> impl Iterator<Item = impl Iterator<Item = B>> + 'a

where B: Clone,

pub fn get_coverage(&self) -> &BTreeMap<usize, N>

pub fn get_coverage_as_vec(&self) -> Vec<N>

pub fn get_region_coverage( &'a self ) -> impl Iterator<Item = (GenomicRange, N)> + 'a

Trait Implementations

impl<'a, B: Clone, N: Clone> Clone for SparseBinnedCoverage<'a, B, N>

fn clone(&self) -> SparseBinnedCoverage<'a, B, N>

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.