Enum BarcodeType 

pub enum BarcodeType {
    Umi,
    Sample,
    Cell,
}

Variants

Umi

Moleculare barcode (UMI)

Sample

Sample barcode

Cell

Cell barcode

Implementations

impl BarcodeType

pub fn parse_type(name: &str) -> Result<Self, Error>

Parses type of barcode

Example

use barkit_extract::pattern::BarcodeType;
use barkit_extract::error::Error::UnexpectedCaptureGroupName;

assert_eq!(BarcodeType::Umi, BarcodeType::parse_type("UMI").unwrap());
assert_eq!(BarcodeType::Sample, BarcodeType::parse_type("SB").unwrap());
assert_eq!(BarcodeType::Cell, BarcodeType::parse_type("CB").unwrap());

Trait Implementations

impl Clone for BarcodeType

fn clone(&self) -> BarcodeType

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for BarcodeType

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Display for BarcodeType

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Eq for BarcodeType

impl PartialEq for BarcodeType

fn eq(&self, other: &BarcodeType) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl StructuralPartialEq for BarcodeType