SequenceMatchResult

barcode_count::parse

Struct SequenceMatchResult 

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pub struct SequenceMatchResult {
    pub sample_barcode: String,
    pub counted_barcodes: Vec<String>,
    pub counted_barcode_error: bool,
    pub sample_barcode_error: bool,
    pub random_barcode: Option<String>,
}
Expand description

A struct to hold the results of the regex search on the sequence along with perform the functions to fix and find

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§sample_barcode: String§counted_barcodes: Vec<String>§counted_barcode_error: bool§sample_barcode_error: bool§random_barcode: Option<String>

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impl SequenceMatchResult

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pub fn new( barcodes: Captures<'_>, barcode_groups: &[String], counted_barcode_seqs: &[AHashSet<String>], counted_barcode_max_errors: &[u16], sample_seqs: &AHashSet<String>, sample_seqs_max_errors: u16, ) -> SequenceMatchResult

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pub fn barcode_string(&self) -> String

Returns a comma separated counted barcodes string. Perfect for CSV file writing

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