Struct barcode_count::parse::SequenceMatchResult

pub struct SequenceMatchResult {
    pub sample_barcode: String,
    pub counted_barcodes: Vec<String>,
    pub counted_barcode_error: bool,
    pub sample_barcode_error: bool,
    pub random_barcode: Option<String>,
}

A struct to hold the results of the regex search on the sequence along with perform the functions to fix and find

Fields

sample_barcode: String

counted_barcodes: Vec<String>

counted_barcode_error: bool

sample_barcode_error: bool

random_barcode: Option<String>

Implementations

impl SequenceMatchResult

pub fn new( barcodes: Captures<'_>, barcode_groups: &[String], counted_barcode_seqs: &[AHashSet<String>], counted_barcode_max_errors: &[u16], sample_seqs: &AHashSet<String>, sample_seqs_max_errors: u16 ) -> SequenceMatchResult

pub fn barcode_string(&self) -> String

Returns a comma separated counted barcodes string. Perfect for CSV file writing