CreateSequenceStoreFluentBuilder

Struct CreateSequenceStoreFluentBuilder 

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pub struct CreateSequenceStoreFluentBuilder { /* private fields */ }
Expand description

Fluent builder constructing a request to CreateSequenceStore.

Creates a sequence store and returns its metadata. Sequence stores are used to store sequence data files called read sets that are saved in FASTQ, BAM, uBAM, or CRAM formats. For aligned formats (BAM and CRAM), a sequence store can only use one reference genome. For unaligned formats (FASTQ and uBAM), a reference genome is not required. You can create multiple sequence stores per region per account.

The following are optional parameters you can specify for your sequence store:

  • Use s3AccessConfig to configure your sequence store with S3 access logs (recommended).

  • Use sseConfig to define your own KMS key for encryption.

  • Use eTagAlgorithmFamily to define which algorithm to use for the HealthOmics eTag on objects.

  • Use fallbackLocation to define a backup location for storing files that have failed a direct upload.

  • Use propagatedSetLevelTags to configure tags that propagate to all objects in your store.

For more information, see Creating a HealthOmics sequence store in the Amazon Web Services HealthOmics User Guide.

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impl CreateSequenceStoreFluentBuilder

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pub fn as_input(&self) -> &CreateSequenceStoreInputBuilder

Access the CreateSequenceStore as a reference.

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pub async fn send( self, ) -> Result<CreateSequenceStoreOutput, SdkError<CreateSequenceStoreError, HttpResponse>>

Sends the request and returns the response.

If an error occurs, an SdkError will be returned with additional details that can be matched against.

By default, any retryable failures will be retried twice. Retry behavior is configurable with the RetryConfig, which can be set when configuring the client.

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pub fn customize( self, ) -> CustomizableOperation<CreateSequenceStoreOutput, CreateSequenceStoreError, Self>

Consumes this builder, creating a customizable operation that can be modified before being sent.

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pub fn name(self, input: impl Into<String>) -> Self

A name for the store.

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pub fn set_name(self, input: Option<String>) -> Self

A name for the store.

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pub fn get_name(&self) -> &Option<String>

A name for the store.

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pub fn description(self, input: impl Into<String>) -> Self

A description for the store.

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pub fn set_description(self, input: Option<String>) -> Self

A description for the store.

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pub fn get_description(&self) -> &Option<String>

A description for the store.

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pub fn sse_config(self, input: SseConfig) -> Self

Server-side encryption (SSE) settings for the store.

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pub fn set_sse_config(self, input: Option<SseConfig>) -> Self

Server-side encryption (SSE) settings for the store.

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pub fn get_sse_config(&self) -> &Option<SseConfig>

Server-side encryption (SSE) settings for the store.

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pub fn tags(self, k: impl Into<String>, v: impl Into<String>) -> Self

Adds a key-value pair to tags.

To override the contents of this collection use set_tags.

Tags for the store. You can configure up to 50 tags.

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pub fn set_tags(self, input: Option<HashMap<String, String>>) -> Self

Tags for the store. You can configure up to 50 tags.

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pub fn get_tags(&self) -> &Option<HashMap<String, String>>

Tags for the store. You can configure up to 50 tags.

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pub fn client_token(self, input: impl Into<String>) -> Self

An idempotency token used to dedupe retry requests so that duplicate runs are not created.

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pub fn set_client_token(self, input: Option<String>) -> Self

An idempotency token used to dedupe retry requests so that duplicate runs are not created.

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pub fn get_client_token(&self) -> &Option<String>

An idempotency token used to dedupe retry requests so that duplicate runs are not created.

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pub fn fallback_location(self, input: impl Into<String>) -> Self

An S3 location that is used to store files that have failed a direct upload. You can add or change the fallbackLocation after creating a sequence store. This is not required if you are uploading files from a different S3 bucket.

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pub fn set_fallback_location(self, input: Option<String>) -> Self

An S3 location that is used to store files that have failed a direct upload. You can add or change the fallbackLocation after creating a sequence store. This is not required if you are uploading files from a different S3 bucket.

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pub fn get_fallback_location(&self) -> &Option<String>

An S3 location that is used to store files that have failed a direct upload. You can add or change the fallbackLocation after creating a sequence store. This is not required if you are uploading files from a different S3 bucket.

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pub fn e_tag_algorithm_family(self, input: ETagAlgorithmFamily) -> Self

The ETag algorithm family to use for ingested read sets. The default value is MD5up. For more information on ETags, see ETags and data provenance in the Amazon Web Services HealthOmics User Guide.

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pub fn set_e_tag_algorithm_family( self, input: Option<ETagAlgorithmFamily>, ) -> Self

The ETag algorithm family to use for ingested read sets. The default value is MD5up. For more information on ETags, see ETags and data provenance in the Amazon Web Services HealthOmics User Guide.

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pub fn get_e_tag_algorithm_family(&self) -> &Option<ETagAlgorithmFamily>

The ETag algorithm family to use for ingested read sets. The default value is MD5up. For more information on ETags, see ETags and data provenance in the Amazon Web Services HealthOmics User Guide.

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pub fn propagated_set_level_tags(self, input: impl Into<String>) -> Self

Appends an item to propagatedSetLevelTags.

To override the contents of this collection use set_propagated_set_level_tags.

The tags keys to propagate to the S3 objects associated with read sets in the sequence store. These tags can be used as input to add metadata to your read sets.

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pub fn set_propagated_set_level_tags(self, input: Option<Vec<String>>) -> Self

The tags keys to propagate to the S3 objects associated with read sets in the sequence store. These tags can be used as input to add metadata to your read sets.

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pub fn get_propagated_set_level_tags(&self) -> &Option<Vec<String>>

The tags keys to propagate to the S3 objects associated with read sets in the sequence store. These tags can be used as input to add metadata to your read sets.

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pub fn s3_access_config(self, input: S3AccessConfig) -> Self

S3 access configuration parameters. This specifies the parameters needed to access logs stored in S3 buckets. The S3 bucket must be in the same region and account as the sequence store.

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pub fn set_s3_access_config(self, input: Option<S3AccessConfig>) -> Self

S3 access configuration parameters. This specifies the parameters needed to access logs stored in S3 buckets. The S3 bucket must be in the same region and account as the sequence store.

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pub fn get_s3_access_config(&self) -> &Option<S3AccessConfig>

S3 access configuration parameters. This specifies the parameters needed to access logs stored in S3 buckets. The S3 bucket must be in the same region and account as the sequence store.

Trait Implementations§

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impl Clone for CreateSequenceStoreFluentBuilder

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fn clone(&self) -> CreateSequenceStoreFluentBuilder

Returns a duplicate of the value. Read more
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fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more
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impl Debug for CreateSequenceStoreFluentBuilder

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more

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