CreateWorkflowFluentBuilder

aws_sdk_omics::operation::create_workflow::builders

Struct CreateWorkflowFluentBuilder 

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pub struct CreateWorkflowFluentBuilder { /* private fields */ }
Expand description

Fluent builder constructing a request to CreateWorkflow.

Creates a private workflow. Before you create a private workflow, you must create and configure these required resources:

  • Workflow definition files: Define your workflow in one or more workflow definition files, written in WDL, Nextflow, or CWL. The workflow definition specifies the inputs and outputs for runs that use the workflow. It also includes specifications for the runs and run tasks for your workflow, including compute and memory requirements. The workflow definition file must be in .zip format.

  • (Optional) Parameter template: You can create a parameter template file that defines the run parameters, or Amazon Web Services HealthOmics can generate the parameter template for you.

  • ECR container images: Create one or more container images for the workflow. Store the images in a private ECR repository.

  • (Optional) Sentieon licenses: Request a Sentieon license if using the Sentieon software in a private workflow.

For more information, see Creating or updating a private workflow in Amazon Web Services HealthOmics in the Amazon Web Services HealthOmics User Guide.

Implementations§

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impl CreateWorkflowFluentBuilder

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pub fn as_input(&self) -> &CreateWorkflowInputBuilder

Access the CreateWorkflow as a reference.

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pub async fn send( self, ) -> Result<CreateWorkflowOutput, SdkError<CreateWorkflowError, HttpResponse>>

Sends the request and returns the response.

If an error occurs, an SdkError will be returned with additional details that can be matched against.

By default, any retryable failures will be retried twice. Retry behavior is configurable with the RetryConfig, which can be set when configuring the client.

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pub fn customize( self, ) -> CustomizableOperation<CreateWorkflowOutput, CreateWorkflowError, Self>

Consumes this builder, creating a customizable operation that can be modified before being sent.

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pub fn name(self, input: impl Into<String>) -> Self

Name (optional but highly recommended) for the workflow to locate relevant information in the CloudWatch logs and Amazon Web Services HealthOmics console.

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pub fn set_name(self, input: Option<String>) -> Self

Name (optional but highly recommended) for the workflow to locate relevant information in the CloudWatch logs and Amazon Web Services HealthOmics console.

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pub fn get_name(&self) -> &Option<String>

Name (optional but highly recommended) for the workflow to locate relevant information in the CloudWatch logs and Amazon Web Services HealthOmics console.

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pub fn description(self, input: impl Into<String>) -> Self

A description for the workflow.

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pub fn set_description(self, input: Option<String>) -> Self

A description for the workflow.

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pub fn get_description(&self) -> &Option<String>

A description for the workflow.

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pub fn engine(self, input: WorkflowEngine) -> Self

The workflow engine for the workflow. This is only required if you have workflow definition files from more than one engine in your zip file. Otherwise, the service can detect the engine automatically from your workflow definition.

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pub fn set_engine(self, input: Option<WorkflowEngine>) -> Self

The workflow engine for the workflow. This is only required if you have workflow definition files from more than one engine in your zip file. Otherwise, the service can detect the engine automatically from your workflow definition.

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pub fn get_engine(&self) -> &Option<WorkflowEngine>

The workflow engine for the workflow. This is only required if you have workflow definition files from more than one engine in your zip file. Otherwise, the service can detect the engine automatically from your workflow definition.

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pub fn definition_zip(self, input: Blob) -> Self

A ZIP archive containing the main workflow definition file and dependencies that it imports for the workflow. You can use a file with a ://fileb prefix instead of the Base64 string. For more information, see Workflow definition requirements in the Amazon Web Services HealthOmics User Guide.

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pub fn set_definition_zip(self, input: Option<Blob>) -> Self

A ZIP archive containing the main workflow definition file and dependencies that it imports for the workflow. You can use a file with a ://fileb prefix instead of the Base64 string. For more information, see Workflow definition requirements in the Amazon Web Services HealthOmics User Guide.

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pub fn get_definition_zip(&self) -> &Option<Blob>

A ZIP archive containing the main workflow definition file and dependencies that it imports for the workflow. You can use a file with a ://fileb prefix instead of the Base64 string. For more information, see Workflow definition requirements in the Amazon Web Services HealthOmics User Guide.

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pub fn definition_uri(self, input: impl Into<String>) -> Self

The S3 URI of a definition for the workflow. The S3 bucket must be in the same region as the workflow.

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pub fn set_definition_uri(self, input: Option<String>) -> Self

The S3 URI of a definition for the workflow. The S3 bucket must be in the same region as the workflow.

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pub fn get_definition_uri(&self) -> &Option<String>

The S3 URI of a definition for the workflow. The S3 bucket must be in the same region as the workflow.

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pub fn main(self, input: impl Into<String>) -> Self

The path of the main definition file for the workflow. This parameter is not required if the ZIP archive contains only one workflow definition file, or if the main definition file is named “main”. An example path is: workflow-definition/main-file.wdl.

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pub fn set_main(self, input: Option<String>) -> Self

The path of the main definition file for the workflow. This parameter is not required if the ZIP archive contains only one workflow definition file, or if the main definition file is named “main”. An example path is: workflow-definition/main-file.wdl.

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pub fn get_main(&self) -> &Option<String>

The path of the main definition file for the workflow. This parameter is not required if the ZIP archive contains only one workflow definition file, or if the main definition file is named “main”. An example path is: workflow-definition/main-file.wdl.

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pub fn parameter_template( self, k: impl Into<String>, v: WorkflowParameter, ) -> Self

Adds a key-value pair to parameterTemplate.

To override the contents of this collection use set_parameter_template.

A parameter template for the workflow. If this field is blank, Amazon Web Services HealthOmics will automatically parse the parameter template values from your workflow definition file. To override these service generated default values, provide a parameter template. To view an example of a parameter template, see Parameter template files in the Amazon Web Services HealthOmics User Guide.

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pub fn set_parameter_template( self, input: Option<HashMap<String, WorkflowParameter>>, ) -> Self

A parameter template for the workflow. If this field is blank, Amazon Web Services HealthOmics will automatically parse the parameter template values from your workflow definition file. To override these service generated default values, provide a parameter template. To view an example of a parameter template, see Parameter template files in the Amazon Web Services HealthOmics User Guide.

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pub fn get_parameter_template( &self, ) -> &Option<HashMap<String, WorkflowParameter>>

A parameter template for the workflow. If this field is blank, Amazon Web Services HealthOmics will automatically parse the parameter template values from your workflow definition file. To override these service generated default values, provide a parameter template. To view an example of a parameter template, see Parameter template files in the Amazon Web Services HealthOmics User Guide.

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pub fn storage_capacity(self, input: i32) -> Self

The default static storage capacity (in gibibytes) for runs that use this workflow or workflow version. The storageCapacity can be overwritten at run time. The storage capacity is not required for runs with a DYNAMIC storage type.

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pub fn set_storage_capacity(self, input: Option<i32>) -> Self

The default static storage capacity (in gibibytes) for runs that use this workflow or workflow version. The storageCapacity can be overwritten at run time. The storage capacity is not required for runs with a DYNAMIC storage type.

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pub fn get_storage_capacity(&self) -> &Option<i32>

The default static storage capacity (in gibibytes) for runs that use this workflow or workflow version. The storageCapacity can be overwritten at run time. The storage capacity is not required for runs with a DYNAMIC storage type.

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pub fn tags(self, k: impl Into<String>, v: impl Into<String>) -> Self

Adds a key-value pair to tags.

To override the contents of this collection use set_tags.

Tags for the workflow. You can define up to 50 tags for the workflow. For more information, see Adding a tag in the Amazon Web Services HealthOmics User Guide.

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pub fn set_tags(self, input: Option<HashMap<String, String>>) -> Self

Tags for the workflow. You can define up to 50 tags for the workflow. For more information, see Adding a tag in the Amazon Web Services HealthOmics User Guide.

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pub fn get_tags(&self) -> &Option<HashMap<String, String>>

Tags for the workflow. You can define up to 50 tags for the workflow. For more information, see Adding a tag in the Amazon Web Services HealthOmics User Guide.

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pub fn request_id(self, input: impl Into<String>) -> Self

An idempotency token to ensure that duplicate workflows are not created when Amazon Web Services HealthOmics submits retry requests.

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pub fn set_request_id(self, input: Option<String>) -> Self

An idempotency token to ensure that duplicate workflows are not created when Amazon Web Services HealthOmics submits retry requests.

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pub fn get_request_id(&self) -> &Option<String>

An idempotency token to ensure that duplicate workflows are not created when Amazon Web Services HealthOmics submits retry requests.

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pub fn accelerators(self, input: Accelerators) -> Self

The computational accelerator specified to run the workflow.

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pub fn set_accelerators(self, input: Option<Accelerators>) -> Self

The computational accelerator specified to run the workflow.

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pub fn get_accelerators(&self) -> &Option<Accelerators>

The computational accelerator specified to run the workflow.

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pub fn storage_type(self, input: StorageType) -> Self

The default storage type for runs that use this workflow. The storageType can be overridden at run time. DYNAMIC storage dynamically scales the storage up or down, based on file system utilization. STATIC storage allocates a fixed amount of storage. For more information about dynamic and static storage types, see Run storage types in the Amazon Web Services HealthOmics User Guide.

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pub fn set_storage_type(self, input: Option<StorageType>) -> Self

The default storage type for runs that use this workflow. The storageType can be overridden at run time. DYNAMIC storage dynamically scales the storage up or down, based on file system utilization. STATIC storage allocates a fixed amount of storage. For more information about dynamic and static storage types, see Run storage types in the Amazon Web Services HealthOmics User Guide.

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pub fn get_storage_type(&self) -> &Option<StorageType>

The default storage type for runs that use this workflow. The storageType can be overridden at run time. DYNAMIC storage dynamically scales the storage up or down, based on file system utilization. STATIC storage allocates a fixed amount of storage. For more information about dynamic and static storage types, see Run storage types in the Amazon Web Services HealthOmics User Guide.

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pub fn readme_markdown(self, input: impl Into<String>) -> Self

The markdown content for the workflow's README file. This provides documentation and usage information for users of the workflow.

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pub fn set_readme_markdown(self, input: Option<String>) -> Self

The markdown content for the workflow's README file. This provides documentation and usage information for users of the workflow.

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pub fn get_readme_markdown(&self) -> &Option<String>

The markdown content for the workflow's README file. This provides documentation and usage information for users of the workflow.

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pub fn parameter_template_path(self, input: impl Into<String>) -> Self

The path to the workflow parameter template JSON file within the repository. This file defines the input parameters for runs that use this workflow. If not specified, the workflow will be created without a parameter template.

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pub fn set_parameter_template_path(self, input: Option<String>) -> Self

The path to the workflow parameter template JSON file within the repository. This file defines the input parameters for runs that use this workflow. If not specified, the workflow will be created without a parameter template.

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pub fn get_parameter_template_path(&self) -> &Option<String>

The path to the workflow parameter template JSON file within the repository. This file defines the input parameters for runs that use this workflow. If not specified, the workflow will be created without a parameter template.

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pub fn readme_path(self, input: impl Into<String>) -> Self

The path to the workflow README markdown file within the repository. This file provides documentation and usage information for the workflow. If not specified, the README.md file from the root directory of the repository will be used.

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pub fn set_readme_path(self, input: Option<String>) -> Self

The path to the workflow README markdown file within the repository. This file provides documentation and usage information for the workflow. If not specified, the README.md file from the root directory of the repository will be used.

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pub fn get_readme_path(&self) -> &Option<String>

The path to the workflow README markdown file within the repository. This file provides documentation and usage information for the workflow. If not specified, the README.md file from the root directory of the repository will be used.

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pub fn definition_repository(self, input: DefinitionRepository) -> Self

The repository information for the workflow definition. This allows you to source your workflow definition directly from a code repository.

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pub fn set_definition_repository( self, input: Option<DefinitionRepository>, ) -> Self

The repository information for the workflow definition. This allows you to source your workflow definition directly from a code repository.

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pub fn get_definition_repository(&self) -> &Option<DefinitionRepository>

The repository information for the workflow definition. This allows you to source your workflow definition directly from a code repository.

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pub fn workflow_bucket_owner_id(self, input: impl Into<String>) -> Self

The Amazon Web Services account ID of the expected owner of the S3 bucket that contains the workflow definition. If not specified, the service skips the validation.

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pub fn set_workflow_bucket_owner_id(self, input: Option<String>) -> Self

The Amazon Web Services account ID of the expected owner of the S3 bucket that contains the workflow definition. If not specified, the service skips the validation.

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pub fn get_workflow_bucket_owner_id(&self) -> &Option<String>

The Amazon Web Services account ID of the expected owner of the S3 bucket that contains the workflow definition. If not specified, the service skips the validation.

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pub fn readme_uri(self, input: impl Into<String>) -> Self

The S3 URI of the README file for the workflow. This file provides documentation and usage information for the workflow. Requirements include:

  • The S3 URI must begin with s3://USER-OWNED-BUCKET/

  • The requester must have access to the S3 bucket and object.

  • The max README content length is 500 KiB.

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pub fn set_readme_uri(self, input: Option<String>) -> Self

The S3 URI of the README file for the workflow. This file provides documentation and usage information for the workflow. Requirements include:

  • The S3 URI must begin with s3://USER-OWNED-BUCKET/

  • The requester must have access to the S3 bucket and object.

  • The max README content length is 500 KiB.

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pub fn get_readme_uri(&self) -> &Option<String>

The S3 URI of the README file for the workflow. This file provides documentation and usage information for the workflow. Requirements include:

  • The S3 URI must begin with s3://USER-OWNED-BUCKET/

  • The requester must have access to the S3 bucket and object.

  • The max README content length is 500 KiB.

Trait Implementations§

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impl Clone for CreateWorkflowFluentBuilder

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fn clone(&self) -> CreateWorkflowFluentBuilder

Returns a duplicate of the value. Read more
1.0.0 · Source§

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more
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impl Debug for CreateWorkflowFluentBuilder

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more

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👎Deprecated since 1.0.1: renamed to resetting() due to conflicts with Vec::clear(). The clear() method will be removed in a future release.

Returns self with the quirk() set to [Quirk :: Clear].

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println!("{}", value.clear());
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fn resetting(&self) -> Painted<&T>

Returns self with the quirk() set to [Quirk :: Resetting].

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println!("{}", value.resetting());
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fn bright(&self) -> Painted<&T>

Returns self with the quirk() set to [Quirk :: Bright].

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println!("{}", value.bright());
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fn on_bright(&self) -> Painted<&T>

Returns self with the quirk() set to [Quirk :: OnBright].

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println!("{}", value.on_bright());
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fn whenever(&self, value: Condition) -> Painted<&T>

Conditionally enable styling based on whether the Condition value applies. Replaces any previous condition.

See the crate level docs for more details.

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Enable styling painted only when both stdout and stderr are TTYs:

use yansi::{Paint, Condition};

painted.red().on_yellow().whenever(Condition::STDOUTERR_ARE_TTY);
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fn new(self) -> Painted<Self>
where Self: Sized,

Create a new Painted with a default Style. Read more
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fn paint<S>(&self, style: S) -> Painted<&Self>
where S: Into<Style>,

Apply a style wholesale to self. Any previous style is replaced. Read more
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impl<T> Same for T

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type Output = T

Should always be Self
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impl<T> ToOwned for T
where T: Clone,

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type Owned = T

The resulting type after obtaining ownership.
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fn to_owned(&self) -> T

Creates owned data from borrowed data, usually by cloning. Read more
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fn clone_into(&self, target: &mut T)

Uses borrowed data to replace owned data, usually by cloning. Read more
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impl<T, U> TryFrom<U> for T
where U: Into<T>,

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type Error = Infallible

The type returned in the event of a conversion error.
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fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

Performs the conversion.
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impl<T, U> TryInto<U> for T
where U: TryFrom<T>,

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type Error = <U as TryFrom<T>>::Error

The type returned in the event of a conversion error.
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fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Performs the conversion.
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impl<T> WithSubscriber for T

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fn with_subscriber<S>(self, subscriber: S) -> WithDispatch<Self>
where S: Into<Dispatch>,

Attaches the provided Subscriber to this type, returning a WithDispatch wrapper. Read more
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fn with_current_subscriber(self) -> WithDispatch<Self>

Attaches the current default Subscriber to this type, returning a WithDispatch wrapper. Read more
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impl<T> ErasedDestructor for T
where T: 'static,