Enum FastqFile 

pub enum FastqFile {
    Plain(FastqReader<File>),
    Gzipped(FastqReader<MultiGzDecoder<File>>),
}

Auto-detecting FASTQ file reader.

Automatically selects plain or gzip reader based on file extension. Files ending in .gz are treated as gzip-compressed.

Variants

Plain(FastqReader<File>)

Plain text FASTQ file.

Gzipped(FastqReader<MultiGzDecoder<File>>)

Gzip-compressed FASTQ file.

Implementations

impl FastqFile

pub fn open<P: AsRef<Path>>(path: P) -> Result<Self>

Opens a FASTQ file with automatic compression detection.

Arguments

• path - Path to FASTQ file (plain or .gz)

Compression Detection

Files with .gz extension are opened with gzip decompression. All other files are opened as plain text.

pub fn read_next(&mut self) -> Result<Option<FastqRecord>>

Reads the next FASTQ record.

Delegates to the appropriate reader based on file type.