Trait varlociraptor::model::evidence::reads::RefBaseEmission

pub trait RefBaseEmission: Debug {
    fn ref_base(&self, i: usize) -> u8;
    fn ref_offset(&self) -> usize;
    fn ref_end(&self) -> usize;
    fn set_ref_offset(&mut self, value: usize);
    fn set_ref_end(&mut self, value: usize);
    fn read_emission(&self) -> &ReadEmission;

    fn shrink_to_hit(&mut self, hit: &EditDistanceHit) { ... }
}

Required methods

fn ref_base(&self, i: usize) -> u8

fn ref_offset(&self) -> usize

fn ref_end(&self) -> usize

fn set_ref_offset(&mut self, value: usize)

fn set_ref_end(&mut self, value: usize)

fn read_emission(&self) -> &ReadEmission

Loading content...

Provided methods

fn shrink_to_hit(&mut self, hit: &EditDistanceHit)

Loading content...

Implementors

impl<'a> RefBaseEmission for DeletionEmissionParams<'a>

fn ref_base(&self, i: usize) -> u8

fn ref_offset(&self) -> usize

fn ref_end(&self) -> usize

fn set_ref_offset(&mut self, value: usize)

fn set_ref_end(&mut self, value: usize)

fn read_emission(&self) -> &ReadEmission

impl<'a> RefBaseEmission for InsertionEmissionParams<'a>

fn ref_base(&self, i: usize) -> u8

fn ref_offset(&self) -> usize

fn ref_end(&self) -> usize

fn set_ref_offset(&mut self, value: usize)

fn set_ref_end(&mut self, value: usize)

fn read_emission(&self) -> &ReadEmission

impl<'a> RefBaseEmission for ReferenceEmissionParams<'a>

fn ref_base(&self, i: usize) -> u8

fn ref_offset(&self) -> usize

fn ref_end(&self) -> usize

fn set_ref_offset(&mut self, value: usize)

fn set_ref_end(&mut self, value: usize)

fn read_emission(&self) -> &ReadEmission

Loading content...