Enum varlociraptor::cli::FilterMethod

pub enum FilterMethod {
    ControlFDR {
        calls: PathBuf,
        vartype: VariantType,
        fdr: f64,
        events: Vec<String>,
        minlen: Option<u32>,
        maxlen: Option<u32>,
    },
    PosteriorOdds {
        odds: KassRaftery,
        events: Vec<String>,
    },
}

Variants

ControlFDR

Fields of ControlFDR

calls: PathBufvartype: VariantTypefdr: f64events: Vec<String>minlen: Option<u32>maxlen: Option<u32>

PosteriorOdds

Fields of PosteriorOdds

odds: KassRafteryevents: Vec<String>

Trait Implementations

impl Clone for FilterMethod

fn clone(&self) -> FilterMethod

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for FilterMethod

fn fmt(&self, f: &mut Formatter) -> Result

Formats the value using the given formatter.

impl Serialize for FilterMethod

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error> where
    __S: Serializer, 

Serialize this value into the given Serde serializer.

impl<'de> Deserialize<'de> for FilterMethod

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error> where
    __D: Deserializer<'de>, 

Deserialize this value from the given Serde deserializer.

impl StructOpt for FilterMethod

fn clap<'a, 'b>() -> App<'a, 'b>

Returns the corresponding clap::App.

fn from_clap(matches: &ArgMatches) -> Self

Creates the struct from clap::ArgMatches. It cannot fail with a parameter generated by clap by construction.

fn from_args() -> Self

Gets the struct from the command line arguments. Print the error message and quit the program in case of failure.

fn from_iter<I>(iter: I) -> Self where
    I: IntoIterator,
    <I as IntoIterator>::Item: Into<OsString>,
    <I as IntoIterator>::Item: Clone, 

Gets the struct from any iterator such as a Vec of your making. Print the error message and quit the program in case of failure.

fn from_iter_safe<I>(iter: I) -> Result<Self, Error> where
    I: IntoIterator,
    <I as IntoIterator>::Item: Into<OsString>,
    <I as IntoIterator>::Item: Clone, 

Gets the struct from any iterator such as a Vec of your making.