[][src]Struct varlociraptor::call::CallerBuilder

pub struct CallerBuilder<A, L, Pr, Po, ModelPayload> where
    A: AlleleFreqs + Ord + Clone,
    L: Likelihood<ModelPayload>,
    Pr: Prior,
    Po: Posterior,
    ModelPayload: Default
{ /* fields omitted */ }

Builder for Caller.

Methods

impl<A, L, Pr, Po, ModelPayload> CallerBuilder<A, L, Pr, Po, ModelPayload> where
    A: AlleleFreqs + Ord + Clone,
    L: Likelihood<ModelPayload>,
    Pr: Prior,
    Po: Posterior,
    ModelPayload: Default
[src]

pub fn samples(self, value: Vec<Sample>) -> Self[src]

pub fn model(self, value: Model<L, Pr, Po, ModelPayload>) -> Self[src]

pub fn omit_snvs(self, value: bool) -> Self[src]

pub fn omit_indels(self, value: bool) -> Self[src]

pub fn max_indel_len(self, value: u32) -> Self[src]

pub fn build(self) -> Result<Caller<A, L, Pr, Po, ModelPayload>, String>[src]

Builds a new Caller.

Errors

If a required field has not been initialized.

impl<A, L, Pr, Po, ModelPayload> CallerBuilder<A, L, Pr, Po, ModelPayload> where
    A: AlleleFreqs + Ord + Clone,
    L: Likelihood<ModelPayload>,
    Pr: Prior,
    Po: Posterior<Event = Vec<Event<A>>>,
    ModelPayload: Default
[src]

pub fn reference<P: AsRef<Path>>(self, path: P) -> Result<Self, Box<dyn Error>>[src]

pub fn inbcf<P: AsRef<Path>>(
    self,
    path: Option<P>
) -> Result<Self, Box<dyn Error>>
[src]

pub fn event<E: Into<Vec<A>>>(self, name: &str, event: E) -> Self[src]

Register events.

pub fn outbcf<P: AsRef<Path>>(
    self,
    path: Option<P>
) -> Result<Self, Box<dyn Error>>
[src]

Trait Implementations

impl<A: Default, L: Default, Pr: Default, Po: Default, ModelPayload: Default> Default for CallerBuilder<A, L, Pr, Po, ModelPayload> where
    A: AlleleFreqs + Ord + Clone,
    L: Likelihood<ModelPayload>,
    Pr: Prior,
    Po: Posterior,
    ModelPayload: Default
[src]

Auto Trait Implementations

impl<A, L, Pr, Po, ModelPayload> Send for CallerBuilder<A, L, Pr, Po, ModelPayload> where
    A: Send,
    L: Send,
    ModelPayload: Send,
    Po: Send,
    Pr: Send

impl<A, L, Pr, Po, ModelPayload> !Sync for CallerBuilder<A, L, Pr, Po, ModelPayload>

Blanket Implementations

impl<T> From<T> for T[src]

impl<T, U> Into<U> for T where
    U: From<T>, 
[src]

impl<T, U> TryFrom<U> for T where
    U: Into<T>, 
[src]

type Error = Infallible

The type returned in the event of a conversion error.

impl<T, U> TryInto<U> for T where
    U: TryFrom<T>, 
[src]

type Error = <U as TryFrom<T>>::Error

The type returned in the event of a conversion error.

impl<T> BorrowMut<T> for T where
    T: ?Sized
[src]

impl<T> Borrow<T> for T where
    T: ?Sized
[src]

impl<T> Any for T where
    T: 'static + ?Sized
[src]