[−][src]Struct varlociraptor::call::CallerBuilder
Builder for Caller
.
Methods
impl<A, L, Pr, Po, ModelPayload> CallerBuilder<A, L, Pr, Po, ModelPayload> where
A: AlleleFreqs + Ord + Clone,
L: Likelihood<ModelPayload>,
Pr: Prior,
Po: Posterior,
ModelPayload: Default,
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A: AlleleFreqs + Ord + Clone,
L: Likelihood<ModelPayload>,
Pr: Prior,
Po: Posterior,
ModelPayload: Default,
pub fn samples(self, value: Vec<Sample>) -> Self
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pub fn model(self, value: Model<L, Pr, Po, ModelPayload>) -> Self
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pub fn omit_snvs(self, value: bool) -> Self
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pub fn omit_indels(self, value: bool) -> Self
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pub fn max_indel_len(self, value: u32) -> Self
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pub fn build(self) -> Result<Caller<A, L, Pr, Po, ModelPayload>, String>
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impl<A, L, Pr, Po, ModelPayload> CallerBuilder<A, L, Pr, Po, ModelPayload> where
A: AlleleFreqs + Ord + Clone,
L: Likelihood<ModelPayload>,
Pr: Prior,
Po: Posterior<Event = Vec<Event<A>>>,
ModelPayload: Default,
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A: AlleleFreqs + Ord + Clone,
L: Likelihood<ModelPayload>,
Pr: Prior,
Po: Posterior<Event = Vec<Event<A>>>,
ModelPayload: Default,
pub fn reference<P: AsRef<Path>>(self, path: P) -> Result<Self, Box<dyn Error>>
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pub fn inbcf<P: AsRef<Path>>(
self,
path: Option<P>
) -> Result<Self, Box<dyn Error>>
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self,
path: Option<P>
) -> Result<Self, Box<dyn Error>>
pub fn event<E: Into<Vec<A>>>(self, name: &str, event: E) -> Self
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Register events.
pub fn outbcf<P: AsRef<Path>>(
self,
path: Option<P>
) -> Result<Self, Box<dyn Error>>
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self,
path: Option<P>
) -> Result<Self, Box<dyn Error>>
Trait Implementations
impl<A: Default, L: Default, Pr: Default, Po: Default, ModelPayload: Default> Default for CallerBuilder<A, L, Pr, Po, ModelPayload> where
A: AlleleFreqs + Ord + Clone,
L: Likelihood<ModelPayload>,
Pr: Prior,
Po: Posterior,
ModelPayload: Default,
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A: AlleleFreqs + Ord + Clone,
L: Likelihood<ModelPayload>,
Pr: Prior,
Po: Posterior,
ModelPayload: Default,
fn default() -> CallerBuilder<A, L, Pr, Po, ModelPayload>
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Auto Trait Implementations
impl<A, L, Pr, Po, ModelPayload> Send for CallerBuilder<A, L, Pr, Po, ModelPayload> where
A: Send,
L: Send,
ModelPayload: Send,
Po: Send,
Pr: Send,
A: Send,
L: Send,
ModelPayload: Send,
Po: Send,
Pr: Send,
impl<A, L, Pr, Po, ModelPayload> !Sync for CallerBuilder<A, L, Pr, Po, ModelPayload>
Blanket Implementations
impl<T> From<T> for T
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impl<T, U> Into<U> for T where
U: From<T>,
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U: From<T>,
impl<T, U> TryFrom<U> for T where
U: Into<T>,
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U: Into<T>,
type Error = Infallible
The type returned in the event of a conversion error.
fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>
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impl<T, U> TryInto<U> for T where
U: TryFrom<T>,
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U: TryFrom<T>,
type Error = <U as TryFrom<T>>::Error
The type returned in the event of a conversion error.
fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>
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impl<T> BorrowMut<T> for T where
T: ?Sized,
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T: ?Sized,
fn borrow_mut(&mut self) -> &mut T
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impl<T> Borrow<T> for T where
T: ?Sized,
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T: ?Sized,
impl<T> Any for T where
T: 'static + ?Sized,
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T: 'static + ?Sized,