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torsh_graph/conv/
heterogeneous.rs

1//! Heterogeneous Graph Neural Networks
2//!
3//! Implementation of multi-relational GNNs for heterogeneous graphs
4//! with different node types and edge types, as specified in TODO.md
5// Framework infrastructure - components designed for future use
6#![allow(dead_code)]
7/// Crate-local result alias: the error type defaults to [`TorshError`],
8/// so both `Result<T>` and `Result<T, OtherError>` stay valid.
9type Result<T, E = torsh_core::error::TorshError> = std::result::Result<T, E>;
10
11use crate::parameter::Parameter;
12use std::collections::HashMap;
13use torsh_tensor::{
14    creation::{randn, zeros},
15    Tensor,
16};
17
18/// Node type identifier
19pub type NodeType = String;
20
21/// Edge type identifier (source_type, relation, target_type)
22pub type EdgeType = (NodeType, String, NodeType);
23
24/// Heterogeneous graph data structure
25#[derive(Debug, Clone)]
26pub struct HeteroGraphData {
27    /// Node features for each node type
28    pub node_features: HashMap<NodeType, Tensor>,
29    /// Edge indices for each edge type
30    pub edge_indices: HashMap<EdgeType, Tensor>,
31    /// Edge attributes for each edge type (optional)
32    pub edge_attributes: HashMap<EdgeType, Option<Tensor>>,
33    /// Number of nodes per type
34    pub num_nodes: HashMap<NodeType, usize>,
35}
36
37impl HeteroGraphData {
38    /// Create a new heterogeneous graph
39    pub fn new() -> Self {
40        Self {
41            node_features: HashMap::new(),
42            edge_indices: HashMap::new(),
43            edge_attributes: HashMap::new(),
44            num_nodes: HashMap::new(),
45        }
46    }
47
48    /// Add node type with features
49    pub fn add_node_type(&mut self, node_type: NodeType, features: Tensor) -> &mut Self {
50        let num_nodes = features.shape().dims()[0];
51        self.node_features.insert(node_type.clone(), features);
52        self.num_nodes.insert(node_type, num_nodes);
53        self
54    }
55
56    /// Add edge type with indices
57    pub fn add_edge_type(
58        &mut self,
59        edge_type: EdgeType,
60        edge_index: Tensor,
61        edge_attr: Option<Tensor>,
62    ) -> &mut Self {
63        self.edge_indices.insert(edge_type.clone(), edge_index);
64        self.edge_attributes.insert(edge_type, edge_attr);
65        self
66    }
67
68    /// Get all node types
69    pub fn node_types(&self) -> Vec<&NodeType> {
70        self.node_features.keys().collect()
71    }
72
73    /// Get all edge types
74    pub fn edge_types(&self) -> Vec<&EdgeType> {
75        self.edge_indices.keys().collect()
76    }
77}
78
79/// Heterogeneous Graph Neural Network layer
80#[derive(Debug)]
81pub struct HeteroGNN {
82    node_types: Vec<NodeType>,
83    edge_types: Vec<EdgeType>,
84    /// Type-specific transformation layers
85    node_transformations: HashMap<NodeType, Parameter>,
86    /// Relation-specific message functions
87    edge_transformations: HashMap<EdgeType, Parameter>,
88    /// Output dimension
89    out_features: usize,
90    /// Whether to use bias
91    bias: bool,
92    /// Bias parameters per node type
93    biases: HashMap<NodeType, Option<Parameter>>,
94}
95
96impl HeteroGNN {
97    /// Create a new heterogeneous GNN layer
98    pub fn new(
99        node_type_dims: HashMap<NodeType, usize>,
100        edge_types: Vec<EdgeType>,
101        out_features: usize,
102        bias: bool,
103    ) -> Result<Self> {
104        let mut node_transformations = HashMap::new();
105        let mut biases = HashMap::new();
106
107        // Create transformation matrices for each node type
108        for (node_type, in_features) in &node_type_dims {
109            let weight = Parameter::new(randn(&[*in_features, out_features])?);
110            node_transformations.insert(node_type.clone(), weight);
111
112            let bias_param = if bias {
113                Some(Parameter::new(zeros(&[out_features])?))
114            } else {
115                None
116            };
117            biases.insert(node_type.clone(), bias_param);
118        }
119
120        // Create edge transformation matrices
121        let mut edge_transformations = HashMap::new();
122        for edge_type in &edge_types {
123            // Use output features as the message dimension
124            let weight = Parameter::new(randn(&[out_features, out_features])?);
125            edge_transformations.insert(edge_type.clone(), weight);
126        }
127
128        Ok(Self {
129            node_types: node_type_dims.keys().cloned().collect(),
130            edge_types,
131            node_transformations,
132            edge_transformations,
133            out_features,
134            bias,
135            biases,
136        })
137    }
138
139    /// Forward pass through heterogeneous GNN
140    pub fn forward(&self, hetero_graph: &HeteroGraphData) -> Result<HeteroGraphData> {
141        let mut output_features = HashMap::new();
142
143        // Step 1: Transform node features for each node type
144        let mut transformed_features = HashMap::new();
145        for node_type in &self.node_types {
146            if let Some(features) = hetero_graph.node_features.get(node_type) {
147                if let Some(transform) = self.node_transformations.get(node_type) {
148                    let mut transformed = features.matmul(&transform.clone_data())?;
149
150                    // Add bias if present
151                    if let Some(Some(bias)) = self.biases.get(node_type) {
152                        transformed = transformed.add(&bias.clone_data())?;
153                    }
154
155                    transformed_features.insert(node_type.clone(), transformed);
156                }
157            }
158        }
159
160        // Step 2: Message passing for each edge type
161        let mut aggregated_messages = HashMap::new();
162
163        for edge_type in &self.edge_types {
164            let (src_type, relation, dst_type) = edge_type;
165
166            if let (Some(edge_index), Some(src_features), Some(edge_transform)) = (
167                hetero_graph.edge_indices.get(edge_type),
168                transformed_features.get(src_type),
169                self.edge_transformations.get(edge_type),
170            ) {
171                // Get edge connections
172                let edge_flat = edge_index.to_vec()?;
173                let num_edges = edge_flat.len() / 2;
174
175                if num_edges > 0 {
176                    let src_indices = &edge_flat[0..num_edges];
177                    let dst_indices = &edge_flat[num_edges..];
178
179                    // Initialize aggregated messages for destination nodes
180                    let dst_num_nodes = hetero_graph.num_nodes.get(dst_type).unwrap_or(&0);
181                    let messages = zeros(&[*dst_num_nodes, self.out_features])?;
182
183                    // Compute and aggregate messages
184                    for edge_idx in 0..num_edges {
185                        let src_node = src_indices[edge_idx] as usize;
186                        let dst_node = dst_indices[edge_idx] as usize;
187
188                        // Extract source node features
189                        let src_feat = src_features
190                            .slice_tensor(0, src_node, src_node + 1)?
191                            .squeeze_tensor(0)?;
192
193                        // Apply relation-specific transformation
194                        let message = src_feat
195                            .unsqueeze_tensor(0)?
196                            .matmul(&edge_transform.clone_data())?
197                            .squeeze_tensor(0)?;
198
199                        // Aggregate to destination node
200                        let mut dst_slice = messages.slice_tensor(0, dst_node, dst_node + 1)?;
201                        let current_msg = dst_slice.squeeze_tensor(0)?;
202                        let updated_msg = current_msg.add(&message)?;
203                        let _ = dst_slice.copy_(&updated_msg.unsqueeze_tensor(0)?);
204                    }
205
206                    // Store aggregated messages
207                    aggregated_messages.insert(
208                        (src_type.clone(), relation.clone(), dst_type.clone()),
209                        messages,
210                    );
211                }
212            }
213        }
214
215        // Step 3: Combine self-features with aggregated messages
216        for node_type in &self.node_types {
217            let mut node_output = if let Some(self_features) = transformed_features.get(node_type) {
218                self_features.clone()
219            } else {
220                continue;
221            };
222
223            // Add messages from all relevant edge types
224            for edge_type in &self.edge_types {
225                let (_, _, dst_type) = edge_type;
226                if dst_type == node_type {
227                    if let Some(messages) = aggregated_messages.get(edge_type) {
228                        node_output = node_output.add(messages)?;
229                    }
230                }
231            }
232
233            // Apply activation (ReLU)
234            let zero_tensor = zeros(node_output.shape().dims())?;
235            node_output = node_output.maximum(&zero_tensor)?;
236
237            output_features.insert(node_type.clone(), node_output);
238        }
239
240        // Create output heterogeneous graph
241        let mut output = HeteroGraphData::new();
242        output.node_features = output_features;
243        output.edge_indices = hetero_graph.edge_indices.clone();
244        output.edge_attributes = hetero_graph.edge_attributes.clone();
245        output.num_nodes = hetero_graph.num_nodes.clone();
246
247        Ok(output)
248    }
249
250    /// Get all parameters for optimization
251    pub fn parameters(&self) -> Vec<Tensor> {
252        let mut params = Vec::new();
253
254        // Add node transformation parameters
255        for transform in self.node_transformations.values() {
256            params.push(transform.clone_data());
257        }
258
259        // Add edge transformation parameters
260        for transform in self.edge_transformations.values() {
261            params.push(transform.clone_data());
262        }
263
264        // Add bias parameters
265        for bias_opt in self.biases.values() {
266            if let Some(bias) = bias_opt {
267                params.push(bias.clone_data());
268            }
269        }
270
271        params
272    }
273}
274
275/// Heterogeneous Graph Attention Network
276#[derive(Debug)]
277pub struct HeteroGAT {
278    node_types: Vec<NodeType>,
279    edge_types: Vec<EdgeType>,
280    /// Type-specific query/key/value transformations
281    query_transforms: HashMap<NodeType, Parameter>,
282    key_transforms: HashMap<NodeType, Parameter>,
283    value_transforms: HashMap<NodeType, Parameter>,
284    /// Relation-specific attention parameters
285    relation_attentions: HashMap<EdgeType, Parameter>,
286    /// Attention heads
287    heads: usize,
288    /// Output features per head
289    out_features: usize,
290    /// Dropout rate
291    dropout: f32,
292}
293
294impl HeteroGAT {
295    /// Create a new heterogeneous GAT layer
296    pub fn new(
297        node_type_dims: HashMap<NodeType, usize>,
298        edge_types: Vec<EdgeType>,
299        out_features: usize,
300        heads: usize,
301        dropout: f32,
302    ) -> Result<Self> {
303        let mut query_transforms = HashMap::new();
304        let mut key_transforms = HashMap::new();
305        let mut value_transforms = HashMap::new();
306
307        // Create Q, K, V transformations for each node type
308        for (node_type, in_features) in &node_type_dims {
309            let q = Parameter::new(randn(&[*in_features, heads * out_features])?);
310            let k = Parameter::new(randn(&[*in_features, heads * out_features])?);
311            let v = Parameter::new(randn(&[*in_features, heads * out_features])?);
312
313            query_transforms.insert(node_type.clone(), q);
314            key_transforms.insert(node_type.clone(), k);
315            value_transforms.insert(node_type.clone(), v);
316        }
317
318        // Create relation-specific attention parameters
319        let mut relation_attentions = HashMap::new();
320        for edge_type in &edge_types {
321            let attention = Parameter::new(randn(&[heads, 2 * out_features])?);
322            relation_attentions.insert(edge_type.clone(), attention);
323        }
324
325        Ok(Self {
326            node_types: node_type_dims.keys().cloned().collect(),
327            edge_types,
328            query_transforms,
329            key_transforms,
330            value_transforms,
331            relation_attentions,
332            heads,
333            out_features,
334            dropout,
335        })
336    }
337
338    /// Forward pass with heterogeneous attention
339    pub fn forward(&self, hetero_graph: &HeteroGraphData) -> Result<HeteroGraphData> {
340        let mut output_features = HashMap::new();
341
342        // Step 1: Compute Q, K, V for all node types
343        let mut queries = HashMap::new();
344        let mut keys = HashMap::new();
345        let mut values = HashMap::new();
346
347        for node_type in &self.node_types {
348            if let Some(features) = hetero_graph.node_features.get(node_type) {
349                let q = features.matmul(&self.query_transforms[node_type].clone_data())?;
350                let k = features.matmul(&self.key_transforms[node_type].clone_data())?;
351                let v = features.matmul(&self.value_transforms[node_type].clone_data())?;
352
353                // Reshape for multi-head attention [num_nodes, heads, out_features]
354                let num_nodes = features.shape().dims()[0];
355                let q_reshaped = q.view(&[
356                    num_nodes as i32,
357                    self.heads as i32,
358                    self.out_features as i32,
359                ])?;
360                let k_reshaped = k.view(&[
361                    num_nodes as i32,
362                    self.heads as i32,
363                    self.out_features as i32,
364                ])?;
365                let v_reshaped = v.view(&[
366                    num_nodes as i32,
367                    self.heads as i32,
368                    self.out_features as i32,
369                ])?;
370
371                queries.insert(node_type.clone(), q_reshaped);
372                keys.insert(node_type.clone(), k_reshaped);
373                values.insert(node_type.clone(), v_reshaped);
374            }
375        }
376
377        // Step 2: Compute attention and aggregate for each edge type
378        for dst_type in &self.node_types {
379            let dst_num_nodes = hetero_graph.num_nodes.get(dst_type).unwrap_or(&0);
380            let aggregated_output = zeros(&[*dst_num_nodes, self.heads * self.out_features])?;
381
382            // Aggregate from all edge types that target this node type
383            for edge_type in &self.edge_types {
384                let (src_type, _relation, target_type) = edge_type;
385
386                if target_type != dst_type {
387                    continue;
388                }
389
390                if let (
391                    Some(edge_index),
392                    Some(_src_queries),
393                    Some(_dst_keys),
394                    Some(src_values),
395                    Some(_attention_params),
396                ) = (
397                    hetero_graph.edge_indices.get(edge_type),
398                    queries.get(src_type),
399                    keys.get(dst_type),
400                    values.get(src_type),
401                    self.relation_attentions.get(edge_type),
402                ) {
403                    // For simplicity, use mean aggregation with attention weights
404                    // In a full implementation, this would compute proper attention scores
405
406                    let edge_flat = edge_index.to_vec()?;
407                    let num_edges = edge_flat.len() / 2;
408
409                    if num_edges > 0 {
410                        let src_indices = &edge_flat[0..num_edges];
411                        let dst_indices = &edge_flat[num_edges..];
412
413                        // Simple aggregation (placeholder for full attention mechanism)
414                        for edge_idx in 0..num_edges {
415                            let src_node = src_indices[edge_idx] as usize;
416                            let dst_node = dst_indices[edge_idx] as usize;
417
418                            // Extract source value for aggregation
419                            let src_value = src_values
420                                .slice_tensor(0, src_node, src_node + 1)?
421                                .view(&[1, (self.heads * self.out_features) as i32])?
422                                .squeeze_tensor(0)?;
423
424                            // Add to destination (simple sum for now)
425                            let mut dst_slice =
426                                aggregated_output.slice_tensor(0, dst_node, dst_node + 1)?;
427                            let current = dst_slice.squeeze_tensor(0)?;
428                            let updated = current.add(&src_value)?;
429                            let _ = dst_slice.copy_(&updated.unsqueeze_tensor(0)?);
430                        }
431                    }
432                }
433            }
434
435            output_features.insert(dst_type.clone(), aggregated_output);
436        }
437
438        // Create output
439        let mut output = HeteroGraphData::new();
440        output.node_features = output_features;
441        output.edge_indices = hetero_graph.edge_indices.clone();
442        output.edge_attributes = hetero_graph.edge_attributes.clone();
443        output.num_nodes = hetero_graph.num_nodes.clone();
444
445        Ok(output)
446    }
447
448    /// Get parameters
449    pub fn parameters(&self) -> Vec<Tensor> {
450        let mut params = Vec::new();
451
452        // Add Q, K, V parameters
453        for transform in self.query_transforms.values() {
454            params.push(transform.clone_data());
455        }
456        for transform in self.key_transforms.values() {
457            params.push(transform.clone_data());
458        }
459        for transform in self.value_transforms.values() {
460            params.push(transform.clone_data());
461        }
462
463        // Add attention parameters
464        for attention in self.relation_attentions.values() {
465            params.push(attention.clone_data());
466        }
467
468        params
469    }
470}
471
472/// Knowledge Graph Embedding layer
473#[derive(Debug)]
474pub struct KnowledgeGraphEmbedding {
475    entity_types: Vec<NodeType>,
476    relation_types: Vec<String>,
477    /// Entity embeddings
478    entity_embeddings: HashMap<NodeType, Parameter>,
479    /// Relation embeddings
480    relation_embeddings: HashMap<String, Parameter>,
481    /// Embedding dimension
482    embedding_dim: usize,
483}
484
485impl KnowledgeGraphEmbedding {
486    /// Create new knowledge graph embeddings
487    pub fn new(
488        entity_types: Vec<NodeType>,
489        relation_types: Vec<String>,
490        num_entities: HashMap<NodeType, usize>,
491        embedding_dim: usize,
492    ) -> Result<Self> {
493        let mut entity_embeddings = HashMap::new();
494        let mut relation_embeddings = HashMap::new();
495
496        // Create entity embeddings
497        for entity_type in &entity_types {
498            let num = num_entities.get(entity_type).unwrap_or(&100);
499            let embeddings = Parameter::new(randn(&[*num, embedding_dim])?);
500            entity_embeddings.insert(entity_type.clone(), embeddings);
501        }
502
503        // Create relation embeddings
504        for relation in &relation_types {
505            let embeddings = Parameter::new(randn(&[embedding_dim, embedding_dim])?);
506            relation_embeddings.insert(relation.clone(), embeddings);
507        }
508
509        Ok(Self {
510            entity_types,
511            relation_types,
512            entity_embeddings,
513            relation_embeddings,
514            embedding_dim,
515        })
516    }
517
518    /// Get entity embedding
519    pub fn get_entity_embedding(
520        &self,
521        entity_type: &NodeType,
522        entity_id: usize,
523    ) -> Result<Option<Tensor>> {
524        if let Some(embeddings) = self.entity_embeddings.get(entity_type) {
525            Ok(Some(
526                embeddings
527                    .clone_data()
528                    .slice_tensor(0, entity_id, entity_id + 1)?
529                    .squeeze_tensor(0)?,
530            ))
531        } else {
532            Ok(None)
533        }
534    }
535
536    /// Compute triple score (head, relation, tail)
537    pub fn triple_score(
538        &self,
539        head_type: &NodeType,
540        head_id: usize,
541        relation: &String,
542        tail_type: &NodeType,
543        tail_id: usize,
544    ) -> Result<Option<f64>> {
545        if let (Some(head_emb), Some(tail_emb), Some(rel_emb)) = (
546            self.get_entity_embedding(head_type, head_id)?,
547            self.get_entity_embedding(tail_type, tail_id)?,
548            self.relation_embeddings.get(relation),
549        ) {
550            // Simple TransE-style scoring: ||h + r - t||
551            let head_plus_rel = head_emb
552                .unsqueeze_tensor(0)?
553                .matmul(&rel_emb.clone_data())?
554                .squeeze_tensor(0)?;
555
556            let diff = head_plus_rel.sub(&tail_emb)?;
557            let score_tensor = diff.dot(&diff)?;
558            let score = score_tensor.to_vec()?[0] as f64;
559
560            Ok(Some(-score)) // Negative distance as score
561        } else {
562            Ok(None)
563        }
564    }
565
566    /// Get all parameters
567    pub fn parameters(&self) -> Vec<Tensor> {
568        let mut params = Vec::new();
569
570        for emb in self.entity_embeddings.values() {
571            params.push(emb.clone_data());
572        }
573
574        for emb in self.relation_embeddings.values() {
575            params.push(emb.clone_data());
576        }
577
578        params
579    }
580}
581
582#[cfg(test)]
583mod tests {
584    use super::*;
585    use torsh_core::device::DeviceType;
586    use torsh_tensor::creation::from_vec;
587
588    #[test]
589    fn test_hetero_graph_creation() {
590        let mut hetero_graph = HeteroGraphData::new();
591
592        // Add user nodes
593        let user_features = from_vec(vec![1.0, 2.0, 3.0, 4.0], &[2, 2], DeviceType::Cpu)
594            .expect("from vec should succeed");
595        hetero_graph.add_node_type("user".to_string(), user_features);
596
597        // Add item nodes
598        let item_features = from_vec(
599            vec![5.0, 6.0, 7.0, 8.0, 9.0, 10.0],
600            &[2, 3],
601            DeviceType::Cpu,
602        )
603        .expect("operation should succeed");
604        hetero_graph.add_node_type("item".to_string(), item_features);
605
606        // Add user-item edges
607        let edge_index = from_vec(vec![0.0, 1.0, 0.0, 1.0], &[2, 2], DeviceType::Cpu)
608            .expect("from vec should succeed");
609        hetero_graph.add_edge_type(
610            ("user".to_string(), "likes".to_string(), "item".to_string()),
611            edge_index,
612            None,
613        );
614
615        assert_eq!(hetero_graph.node_types().len(), 2);
616        assert_eq!(hetero_graph.edge_types().len(), 1);
617    }
618
619    #[test]
620    fn test_hetero_gnn_creation() {
621        let mut node_dims = HashMap::new();
622        node_dims.insert("user".to_string(), 2);
623        node_dims.insert("item".to_string(), 3);
624
625        let edge_types = vec![("user".to_string(), "likes".to_string(), "item".to_string())];
626
627        let hetero_gnn = HeteroGNN::new(node_dims, edge_types, 8, true);
628        let params = hetero_gnn.expect("operation should succeed").parameters();
629
630        // Should have transformations for 2 node types + 1 edge type + biases
631        assert!(params.len() >= 4);
632    }
633
634    #[test]
635    fn test_knowledge_graph_embeddings() {
636        let entity_types = vec!["person".to_string(), "company".to_string()];
637        let relation_types = vec!["works_at".to_string(), "founded".to_string()];
638
639        let mut num_entities = HashMap::new();
640        num_entities.insert("person".to_string(), 10);
641        num_entities.insert("company".to_string(), 5);
642
643        let kg_emb = KnowledgeGraphEmbedding::new(entity_types, relation_types, num_entities, 50)
644            .expect("operation should succeed");
645
646        // Test embedding retrieval
647        let person_emb = kg_emb
648            .get_entity_embedding(&"person".to_string(), 0)
649            .expect("operation should succeed");
650        assert!(person_emb.is_some());
651
652        let emb = person_emb;
653        assert_eq!(emb.expect("operation should succeed").shape().dims(), &[50]);
654
655        // Test triple scoring
656        let score = kg_emb
657            .triple_score(
658                &"person".to_string(),
659                0,
660                &"works_at".to_string(),
661                &"company".to_string(),
662                0,
663            )
664            .expect("operation should succeed");
665        assert!(score.is_some());
666        assert!(score.expect("operation should succeed").is_finite());
667    }
668}