Expand description
Data sources for the TCA. Datasources module.
Modules§
- bam
- BAM module. Data source for BAM files.
- bcf
- BCF module. BCF data source.
- bed
- BED module. BED data source.
- fasta
- FASTA module.
- fastq
- FASTQ module. FASTQ data source.
- genbank
- GenBank module. Genbank Datasource Module
- gff
- GFF module. GFF Datasource Module
- hmmdomtab
- HMMDOMTAB module. A datafusion compatible datasource for HMMER3 domain tabular output files.
- sam
- SAM module. Implementations to adapt SAM files to datafusion.
- vcf
- VCF module. VCF data source.
Structs§
- TCAListing
Table Factory - A
ListingTableFactorythat adapts TCA FileFormats toTableProviders.
Enums§
- TCAFile
Type - The type of file.
Constants§
- DEFAULT_
BATCH_ SIZE - Default batch size.
Functions§
- infer_
tca_ format - Infer the file type from the file extension.