Module streaming_query 

Streaming query for efficient k-mer lookups

This module implements streaming queries, which optimize lookup performance when querying consecutive k-mers (sliding window over a sequence).

Key optimizations:

• Incremental k-mer updates (drop first base, add last base)
• Reuse minimizer state across adjacent k-mers
• Extend within the same string when possible (avoiding MPHF lookups)
• Skip searches when minimizer unchanged and previous lookup failed

Structs

LookupResult

Result of a k-mer lookup

StreamingQuery

Streaming query engine for efficient consecutive k-mer lookups

StreamingQueryEngine

Streaming query engine integrated with Dictionary

StreamingQueryStats

Statistics from streaming queries