Crate spillover_bio 

Genomics-opinionated disk-spilling sort for FASTQ/FASTA records.

spillover-bio builds on the generic spillover crate to provide a ready-to-use external sorter for sequence records. It supplies genomics-specific sort keys, sequence-focused dedup strategies on sorted output, and uses the dryice format for temporary on-disk storage.

Modules

codec

Dryice-backed codecs for spillover’s sort engine.

key

Packed sequence keys for dryice record key storage.

radix

In-place MSD radix sort for genomic sequence records.

record

Sequence record type for spillover-bio.

sort

Genomics-specific sort keys, sort orders, and the sorter builder.