slow5_rec_t

Type Alias slow5_rec_t 

Source
pub type slow5_rec_t = slow5_rec;
Expand description

@struct slow5_rec SLOW5 record data struct (represents a single SLOW5 record)

Aliased Type§

#[repr(C)]
pub struct slow5_rec_t { pub read_id_len: u16, pub read_id: *mut i8, pub read_group: u32, pub digitisation: f64, pub offset: f64, pub range: f64, pub sampling_rate: f64, pub len_raw_signal: u64, pub raw_signal: *mut i16, pub aux_map: *mut kh_slow5_s2a_s, }

Fields§

§read_id_len: u16

< length of the read ID string (does not include null character)

§read_id: *mut i8

< macro magic that generates the primary fields (see below) < char* read_id; < uint32_t read_group; < double digitisation; < double offset; < double range; < double sampling_rate; < uint64_t len_raw_signal; < int16_t* raw_signal;

§read_group: u32

< macro magic that generates the primary fields (see below) < char* read_id; < uint32_t read_group; < double digitisation; < double offset; < double range; < double sampling_rate; < uint64_t len_raw_signal; < int16_t* raw_signal;

§digitisation: f64

< macro magic that generates the primary fields (see below) < char* read_id; < uint32_t read_group; < double digitisation; < double offset; < double range; < double sampling_rate; < uint64_t len_raw_signal; < int16_t* raw_signal;

§offset: f64

< macro magic that generates the primary fields (see below) < char* read_id; < uint32_t read_group; < double digitisation; < double offset; < double range; < double sampling_rate; < uint64_t len_raw_signal; < int16_t* raw_signal;

§range: f64

< macro magic that generates the primary fields (see below) < char* read_id; < uint32_t read_group; < double digitisation; < double offset; < double range; < double sampling_rate; < uint64_t len_raw_signal; < int16_t* raw_signal;

§sampling_rate: f64

< macro magic that generates the primary fields (see below) < char* read_id; < uint32_t read_group; < double digitisation; < double offset; < double range; < double sampling_rate; < uint64_t len_raw_signal; < int16_t* raw_signal;

§len_raw_signal: u64

< macro magic that generates the primary fields (see below) < char* read_id; < uint32_t read_group; < double digitisation; < double offset; < double range; < double sampling_rate; < uint64_t len_raw_signal; < int16_t* raw_signal;

§raw_signal: *mut i16

< macro magic that generates the primary fields (see below) < char* read_id; < uint32_t read_group; < double digitisation; < double offset; < double range; < double sampling_rate; < uint64_t len_raw_signal; < int16_t* raw_signal;

§aux_map: *mut kh_slow5_s2a_s

< Auxiliary field name string -> auxiliary field data value. Not to be directly accessed, use provided functions instead.