Struct seq_io::fastq::OwnedRecord

pub struct OwnedRecord {
    pub head: Vec<u8>,
    pub seq: Vec<u8>,
    pub qual: Vec<u8>,
}

A FASTQ record that ownes its data (requires allocations)

Fields

head: Vec<u8>

seq: Vec<u8>

qual: Vec<u8>

Trait Implementations

impl Clone for OwnedRecord

fn clone(&self) -> OwnedRecord

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for OwnedRecord

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<'de> Deserialize<'de> for OwnedRecord

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl PartialEq<OwnedRecord> for OwnedRecord

fn eq(&self, other: &OwnedRecord) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

This method tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Record for OwnedRecord

fn head(&self) -> &[u8]

Return the header line of the record as byte slice

fn seq(&self) -> &[u8]

Return the FASTQ sequence as byte slice

fn qual(&self) -> &[u8]

Return the FASTQ qualities as byte slice

fn id_bytes(&self) -> &[u8]

fn id(&self) -> Result<&str, Utf8Error>

Return the ID of the record (everything before an optional space) as string slice

fn desc_bytes(&self) -> Option<&[u8]>

fn desc(&self) -> Option<Result<&str, Utf8Error>>

Return the description of the record as string slice, if present. Otherwise, None is returned.

fn id_desc_bytes(&self) -> (&[u8], Option<&[u8]>)

Return both the ID and the description of the record (if present) This should be faster than calling id() and desc() separately.

fn id_desc(&self) -> Result<(&str, Option<&str>), Utf8Error>

Return both the ID and the description of the record (if present) This should be faster than calling id() and desc() separately.

fn write<W: Write>(&self, writer: W) -> Result<()>

Writes a record to the given io::Write instance

impl Serialize for OwnedRecord

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>where __S: Serializer,

Serialize this value into the given Serde serializer.

impl Eq for OwnedRecord

impl StructuralEq for OwnedRecord

impl StructuralPartialEq for OwnedRecord