Expand description
Transcript record: identity, lengths, accumulated mass/counts, and the effective-length computation.
Mirrors the modeling-relevant parts of salmon’s Transcript
(include/.../model/Transcript.hpp). Mutable count/mass state is stored in
atomics so worker threads can update it concurrently during a quantification
round, matching the C++ design. Per-transcript sequence storage and bias
state are added in a later phase (bias models).
Structs§
- Transcript
- A reference transcript and its mutable quantification state.