Module rust_htslib::bcf
[−]
[src]
Module for working with VCF and BCF files.
Performance Remarks
Note that BCF corresponds to the in-memory representation of BCF/VCF records in Htslib itself. Thus, it comes without a runtime penalty for parsing, in contrast to reading VCF files.
Re-exports
pub use bcf::header::Header; |
pub use bcf::header::HeaderRecord; |
pub use bcf::record::Record; |
Modules
| buffer | |
| header | |
| record |
Structs
| IndexedReader |
An indexed VCF/BCF reader. |
| Reader |
A VCF/BCF reader. |
| Records | |
| Writer |
A VCF/BCF writer. |
Enums
| BCFError | |
| BCFPathError | |
| FetchError | |
| IndexedReaderError | |
| IndexedReaderPathError | |
| ReadError | |
| ThreadingError | |
| WriteError |
Constants
| GT_MISSING |
Redefinition of corresponding |
Traits
| Read |
A trait for a BCF reader with a read method. |
Functions
| set_threads |
Implementation for |