Skip to main content

Module fai

Module fai 

Source
Expand description

Parser for FASTA index (.fai) files using noodles.

FAI format provides name and length for each contig, but no MD5 or aliases. Format: name\tlength\toffset\tline_bases\tline_width

Functionsยง

parse_fai_file
Parse a FASTA index (.fai) file using noodles
parse_fai_text
Parse FAI from text (fallback for raw text input)