Module base_validation_ffi

Module base_validation_ffi 

Source

Structs§

BaseCounts
Validate an entire sequence, counting valid and invalid bases
PositionArray
Find positions of invalid bases (N or other) in a sequence

Functions§

ragc_count_base_validity
ragc_find_invalid_base_positions
ragc_free_position_array
ragc_is_valid_base
Check if a base is a valid ACGT nucleotide
ragc_should_reset_kmer
Check if a base requires k-mer reset