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/// Module containing the [errors].
pub mod errors;
/// Module containing the [native] structs.
pub mod subject_native;
use std::{fs::read_to_string, path::Path};
use crate::errors::Error;
use crate::subject_native::SubjectNative;
/// Parses a Prelude native XML file into a `Native` stuct.
///
/// # Example
///
/// ```
/// use std::path::Path;
///
/// use prelude_xml_parser::parse_subject_native_file;
///
/// let file_path = Path::new("tests/assets/subject_native.xml");
/// let native = parse_subject_native_file(&file_path).unwrap();
///
/// assert!(native.patients.len() >= 1, "Vector length is less than 1");
/// ```
pub fn parse_subject_native_file(xml_path: &Path) -> Result<SubjectNative, Error> {
if !xml_path.exists() {
return Err(Error::FileNotFound(xml_path.to_path_buf()));
}
let xml_file = read_to_string(xml_path)?;
let native = parse_subject_native_string(&xml_file)?;
Ok(native)
}
/// Parse a string of Preliude native site XML into a `Native` struct.
///
/// # Example
///
/// ```
/// use chrono::{DateTime, Utc};
/// use prelude_xml_parser::parse_subject_native_string;
/// use prelude_xml_parser::subject_native::*;
///
/// let xml = r#"<export_from_vision_EDC date="30-May-2024 10:35 -0500" createdBy="Paul Sanders" role="Project Manager" numberSubjectsProcessed="4">
/// <patient patientId="ABC-001" uniqueId="1681574905819" whenCreated="2023-04-15 12:09:02 -0400" creator="Paul Sanders" siteName="Some Site" siteUniqueId="1681574834910" lastLanguage="English" numberOfForms="6">
/// <form name="day.0.form.name.demographics" lastModified="2023-04-15 12:09:15 -0400" whoLastModifiedName="Paul Sanders" whoLastModifiedRole="Project Manager" whenCreated="1681574905839" hasErrors="false" hasWarnings="false" locked="false" user="" dateTimeChanged="" formTitle="Demographics" formIndex="1" formGroup="Day 0" formState="In-Work">
/// <state value="form.state.in.work" signer="Paul Sanders - Project Manager" signerUniqueId="1681162687395" dateSigned="2023-04-15 12:09:02 -0400"/>
/// <category name="Demographics" type="normal" highestIndex="0">
/// <field name="breed" type="combo-box" dataType="string" errorCode="valid" whenCreated="2023-04-15 12:08:26 -0400" keepHistory="true">
/// <entry id="1">
/// <value by="Paul Sanders" byUniqueId="1681162687395" role="Project Manager" when="2023-04-15 12:09:02 -0400" xml:space="preserve">Labrador</value>
/// </entry>
/// </field>
/// </category>
/// </form>
/// </patient>
/// <patient patientId="DEF-002" uniqueId="1681574905820" whenCreated="2023-04-16 12:10:02 -0400" creator="Wade Watts" siteName="Another Site" siteUniqueId="1681574834911" lastLanguage="" numberOfForms="8">
/// <form name="day.0.form.name.demographics" lastModified="2023-04-16 12:10:15 -0400" whoLastModifiedName="Barney Rubble" whoLastModifiedRole="Technician" whenCreated="1681574905838" hasErrors="false" hasWarnings="false" locked="false" user="" dateTimeChanged="" formTitle="Demographics" formIndex="1" formGroup="Day 0" formState="In-Work">
/// <state value="form.state.in.work" signer="Paul Sanders - Project Manager" signerUniqueId="1681162687395" dateSigned="2023-04-16 12:10:02 -0400"/>
/// <category name="Demographics" type="normal" highestIndex="0">
/// <field name="breed" type="combo-box" dataType="string" errorCode="valid" whenCreated="2023-04-15 12:08:26 -0400" keepHistory="true">
/// <entry id="1">
/// <value by="Paul Sanders" byUniqueId="1681162687395" role="Project Manager" when="2023-04-15 12:09:02 -0400" xml:space="preserve">Labrador</value>
/// </entry>
/// </field>
/// </category>
/// </form>
/// </patient>
/// </export_from_vision_EDC>
/// "#;
///
/// let expected = SubjectNative {
/// patients: vec![
/// Patient {
/// patient_id: "ABC-001".to_string(),
/// unique_id: "1681574905819".to_string(),
/// when_created: DateTime::parse_from_rfc3339("2023-04-15T16:09:02Z")
/// .unwrap()
/// .with_timezone(&Utc),
/// creator: "Paul Sanders".to_string(),
/// site_name: "Some Site".to_string(),
/// site_unique_id: "1681574834910".to_string(),
/// last_language: Some("English".to_string()),
/// number_of_forms: 6,
/// forms: Some(vec![Form {
/// name: "day.0.form.name.demographics".to_string(),
/// last_modified: Some(DateTime::parse_from_rfc3339("2023-04-15T16:09:15Z")
/// .unwrap()
/// .with_timezone(&Utc)),
/// who_last_modified_name: Some("Paul Sanders".to_string()),
/// who_last_modified_role: Some("Project Manager".to_string()),
/// when_created: 1681574905839,
/// has_errors: false,
/// has_warnings: false,
/// locked: false,
/// user: None,
/// date_time_changed: None,
/// form_title: "Demographics".to_string(),
/// form_index: 1,
/// form_group: "Day 0".to_string(),
/// form_state: "In-Work".to_string(),
/// states: Some(vec![State {
/// value: "form.state.in.work".to_string(),
/// signer: "Paul Sanders - Project Manager".to_string(),
/// signer_unique_id: "1681162687395".to_string(),
/// date_signed: Some(
/// DateTime::parse_from_rfc3339("2023-04-15T16:09:02Z")
/// .unwrap()
/// .with_timezone(&Utc),
/// ),
/// }]),
/// categories: Some(vec![Category {
/// name: "Demographics".to_string(),
/// category_type: "normal".to_string(),
/// highest_index: 0,
/// fields: vec![Field {
/// name: "breed".to_string(),
/// field_type: "combo-box".to_string(),
/// data_type: "string".to_string(),
/// error_code: "valid".to_string(),
/// when_created: DateTime::parse_from_rfc3339("2023-04-15T16:08:26Z")
/// .unwrap()
/// .with_timezone(&Utc),
/// keep_history: true,
/// entries: Some(vec![Entry {
/// id: "1".to_string(),
/// value: Some(Value {
/// by: "Paul Sanders".to_string(),
/// by_unique_id: Some("1681162687395".to_string()),
/// role: "Project Manager".to_string(),
/// when: DateTime::parse_from_rfc3339("2023-04-15T16:09:02Z")
/// .unwrap()
/// .with_timezone(&Utc),
/// value: "Labrador".to_string(),
/// }),
/// }]),
/// }],
/// }]),
/// }]),
/// },
/// Patient {
/// patient_id: "DEF-002".to_string(),
/// unique_id: "1681574905820".to_string(),
/// when_created: DateTime::parse_from_rfc3339("2023-04-16T16:10:02Z")
/// .unwrap()
/// .with_timezone(&Utc),
/// creator: "Wade Watts".to_string(),
/// site_name: "Another Site".to_string(),
/// site_unique_id: "1681574834911".to_string(),
/// last_language: None,
/// number_of_forms: 8,
/// forms: Some(vec![Form {
/// name: "day.0.form.name.demographics".to_string(),
/// last_modified: Some(DateTime::parse_from_rfc3339("2023-04-16T16:10:15Z")
/// .unwrap()
/// .with_timezone(&Utc)),
/// who_last_modified_name: Some("Barney Rubble".to_string()),
/// who_last_modified_role: Some("Technician".to_string()),
/// when_created: 1681574905838,
/// has_errors: false,
/// has_warnings: false,
/// locked: false,
/// user: None,
/// date_time_changed: None,
/// form_title: "Demographics".to_string(),
/// form_index: 1,
/// form_group: "Day 0".to_string(),
/// form_state: "In-Work".to_string(),
/// states: Some(vec![State {
/// value: "form.state.in.work".to_string(),
/// signer: "Paul Sanders - Project Manager".to_string(),
/// signer_unique_id: "1681162687395".to_string(),
/// date_signed: Some(
/// DateTime::parse_from_rfc3339("2023-04-16T16:10:02Z")
/// .unwrap()
/// .with_timezone(&Utc),
/// ),
/// }]),
/// categories: Some(vec![Category {
/// name: "Demographics".to_string(),
/// category_type: "normal".to_string(),
/// highest_index: 0,
/// fields: vec![Field {
/// name: "breed".to_string(),
/// field_type: "combo-box".to_string(),
/// data_type: "string".to_string(),
/// error_code: "valid".to_string(),
/// when_created: DateTime::parse_from_rfc3339("2023-04-15T16:08:26Z")
/// .unwrap()
/// .with_timezone(&Utc),
/// keep_history: true,
/// entries: Some(vec![Entry {
/// id: "1".to_string(),
/// value: Some(Value {
/// by: "Paul Sanders".to_string(),
/// by_unique_id: Some("1681162687395".to_string()),
/// role: "Project Manager".to_string(),
/// when: DateTime::parse_from_rfc3339("2023-04-15T16:09:02Z")
/// .unwrap()
/// .with_timezone(&Utc),
/// value: "Labrador".to_string(),
/// }),
/// }]),
/// }],
/// }]),
/// }]),
/// },
/// ],
/// };
/// let result = parse_subject_native_string(xml).unwrap();
/// assert_eq!(result, expected);
/// ```
pub fn parse_subject_native_string(xml_str: &str) -> Result<SubjectNative, Error> {
let native: SubjectNative = serde_xml_rs::from_str(xml_str)?;
Ok(native)
}