Crate phyloprob

Re-exports§

pub use utils::*;

Modules§

utils

Structs§

FastaRecord
Options: A description of the options that a program can handle.
Pool: A threadpool that acts as a handle to a number of threads spawned at construction.
StaFeParams
StaInsidePartFuncMatSets
StaInsidePartFuncMats
TmpStaInsidePartFuncMatSets

Constants§

DEFAULT_EXTENDING_GAP_PENALTY
DEFAULT_MIN_BPP
DEFAULT_OFFSET_4_MAX_GAP_NUM
DEFAULT_OPENING_GAP_PENALTY
MAX_GAP_NUM_4_IL
MIN_GAP_NUM_4_IL
MIN_SEQ_LENGTH_4_LOGSUMEXP_METHOD

Functions§

from_utf8_unchecked^⚠: Converts a slice of bytes to a string slice without checking that the string contains valid UTF-8.
get_backward_tmp_sta_inside_part_func_mat_sets
get_forward_tmp_sta_inside_part_func_mat_sets
get_max_bp_span
get_seq_len_diff
get_sta_inside_part_func_mat_sets
get_sta_outside_part_func_4d_mat_4_bpas
io_algo_4_bpap_mat
multizip: An iterator that generalizes .zip() and allows running multiple iterators in lockstep.
pct_of_bpp_and_upp_mat
phyloprob
print_program_usage
remove_small_bpps_from_bpp_mat

Type Aliases§