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  • perbase-0.10.3
    • perbase 0.10.3
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    • sstadick
    • Dependencies
      • anyhow ^1.0.41 normal
      • bio ^0.41 normal
      • crossbeam ^0.8 normal
      • crossbeam-channel ^0.5 normal
      • csv ^1.1.6 normal
      • env_logger ^0.9.0 normal
      • grep-cli ^0.1.5 normal
      • gzp ^0.10 normal
      • itertools ^0.10.1 normal
      • lazy_static ^1.4.0 normal
      • log ^0.4.11 normal
      • lru_time_cache ^0.11.1 normal
      • num_cpus ^1.13.0 normal
      • rayon ^1.4.0 normal
      • rust-htslib ^0.39 normal
      • rust-lapper ^1.0 normal
      • serde ^1.0.116 normal
      • smartstring ^1.0.1 normal
      • structopt ^0.3.18 normal
      • termcolor ^1.1.0 normal
      • proptest ^1.0.0 dev
      • rstest ^0.11.0 dev
      • tempfile ^3.1.0 dev
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    • x86_64-unknown-linux-gnu
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perbase_lib0.10.3

Crate Items

  • Structs
  • Constants
  • Traits
  • Functions

List of all items

Structs

  • par_granges::CHANNEL_SIZE_MODIFIER_STR
  • par_granges::CHUNKSIZE_STR
  • par_granges::ParGranges
  • position::pileup_position::PileupPosition
  • position::range_positions::BedFormatRangePositions
  • position::range_positions::RangePositions
  • read_filter::DefaultReadFilter
  • reference::Buffer
  • utils::NUM_CPU

Traits

  • par_granges::RegionProcessor
  • position::Position
  • read_filter::ReadFilter

Functions

  • utils::determine_allowed_cpus
  • utils::get_reader
  • utils::get_writer
  • utils::is_bgzipped
  • utils::is_broken_pipe
  • utils::set_rayon_global_pools_size

Constants

  • par_granges::CHANNEL_SIZE_MODIFIER
  • par_granges::CHUNKSIZE