Patoz is a strict, type safe PDB file parser. Converts text PDB file into a traversable record struct.
Contains parsers related to Author records. The AUTHOR record contains the names of the people responsible for the contents of the entry.
Contains parsers related to Caveat records. CAVEAT warns of errors and unresolved issues in the entry. Use caution when using an entry containing this record.
Contains parsers related to Compnd records. The COMPND record describes the macromolecular contents of an entry. Also contains tokens parsers which are utilized from other records such as SOURCE records
Contains parsers related to Expdta records.
Contains parsers related to Header records. Header record gives information about identity of this pdb file.
Contains parsers related to Jrnl records.
Contains parsers related to Keywds records. The KEYWDS record contains a set of terms relevant to the entry.
Contains parsers related to Mdltyp records.
Contains parsers related to Nummdl records Nummdl record is a single line record having number of models inside the pdb entry. There is only one record per pdb.
Contains parsers related to Obslte records. Obslte record indicates that this entry is removed from PDB and replaced with another entry.
contains lowest level parsers that are used by multiple record parsers
Contains parsers related to Revdat records.
Contains parsers related to Source records. The SOURCE record specifies the biological or chemical source of each molecule in this entry..
Contains parsers related to Split records. The SPLIT record is used in instances where a specific entry composes part of a large macromolecular complex. It will identify the PDB entries that are required to reconstitute a complete complex.
Contains parsers related to Sprsde records. The SPRSDE records contain a list of the ID codes of entries that were made obsolete by the given coordinate entry and removed from the PDB release set.
Contains parsers related to Title records.The TITLE record contains a title for the experiment or analysis that is represented in the entry.
Holds name of an author utilized by multiple parsers such as author and journal author parsers
fallacies of this entry
collection of tokens in a CMPND record
experimanetal techniques used for exploring structure of this entry
contains HEADER recor information
journal author collection
journal Citation fields
digital object identifier of related e-pub
journal editor collection
journal PubMed id
journal publication fields
keywords related to the entry
model type of the entry
number of models in this file
contains pdb entry ids which removed this one from PDB
Represents a modification made to this pdb entry.
collection of revisions
collection of tokens in a SOURCE record
if this entry is a part of bigger structure, this struct holds ids of other parts of the bigger structure
pdb entry ids made obsolete by this entry
result of a TITLE record
Experimental techniques utilized in obtaining structure data
modification type of REVDAT record
main enum unifying all record parser results. all sub parsers return a cariant of this
Serial Number Type of a JRNL REFN record
Represents keys of CMPND and SOURCE records
main parse function
Holds the result of parsing functions