Crate onehot_dna 

Fixed-length one-hot DNA encoding for small barcode/primer matching.

Encoding:

• A = 0001
• C = 0010
• G = 0100
• T = 1000
• anything else, including N, becomes 0000

This means unknown bases match nothing and count as mismatches. That is usually what you want for barcode correction.

OneHot<N> stores N bases in a u128, using four bits per base. Therefore N <= 32.

Structs

OneHot

Fixed-length one-hot DNA sequence.

OneHotSet

Enums

OneHotError

Error returned when constructing a OneHot sequence.

Type Aliases

OneHot9

Convenience alias for BD Rhapsody C1/C2/C3 9 bp blocks.