ome_metadata/
lib.rs

1#![allow(non_camel_case_types)]
2pub mod ome;
3
4pub mod error;
5#[cfg(feature = "python")]
6mod py;
7
8use crate::error::Error;
9pub use ome::Ome;
10use quick_xml::de::from_str;
11use std::str::FromStr;
12
13impl FromStr for Ome {
14    type Err = Error;
15
16    fn from_str(s: &str) -> Result<Self, Error> {
17        Ok(from_str(s)?)
18    }
19}
20
21#[cfg(test)]
22mod tests {
23    use super::*;
24    use std::fs::read_to_string;
25
26    macro_rules! test_read {
27        ($($name:ident: $file:expr $(,)?)*) => {
28            $(
29                #[test]
30                fn $name() -> Result<(), Error> {
31                    let file = read_to_string(format!("tests/{}.xml", $file))?;
32                    let _ome: Ome = file.parse()?;
33                    Ok(())
34                }
35            )*
36        };
37    }
38
39    test_read!(
40        a: "YTL1849A111_2023_05_04__14_46_19_cellnr_1_track"
41        b: "Experiment-2029"
42        c: "test"
43        d: "4-Pos_001_002"
44        e: "YTL1841B2-2-1_1hr_DMSO_galinduction_1"
45        f: "1xp53-01-AP1"
46        g: "YTL378_JF552"
47        h: "MK022_cE9_1-01-Airyscan Processing-01-Scene-2-P1"
48        i: "beads_2023_05_04__19_00_22"
49        j: "20230511-p53-4x-CMV-1min-4h-01-Airyscan Processing-01"
50        k: "YTL1849A131_2023_05_04__13_36_36"
51    );
52}
ome_metadata/lib.rs

ome_metadata/
lib.rs
