ome_metadata/
lib.rs

1#![allow(non_camel_case_types)]
2pub mod ome;
3
4#[cfg(feature = "python")]
5mod py;
6
7use anyhow::{Error, Result};
8pub use ome::Ome;
9use quick_xml::de::from_str;
10use std::str::FromStr;
11
12impl FromStr for Ome {
13    type Err = Error;
14
15    fn from_str(s: &str) -> Result<Self> {
16        Ok(from_str(s)?)
17    }
18}
19
20#[cfg(test)]
21mod tests {
22    use super::*;
23    use std::fs::read_to_string;
24
25    macro_rules! test_read {
26        ($($name:ident: $file:expr $(,)?)*) => {
27            $(
28                #[test]
29                fn $name() -> Result<()> {
30                    let file = read_to_string(format!("tests/{}.xml", $file))?;
31                    let _ome: Ome = file.parse()?;
32                    Ok(())
33                }
34            )*
35        };
36    }
37
38    test_read!(
39        a: "YTL1849A111_2023_05_04__14_46_19_cellnr_1_track"
40        b: "Experiment-2029"
41        c: "test"
42        d: "4-Pos_001_002"
43        e: "YTL1841B2-2-1_1hr_DMSO_galinduction_1"
44        f: "1xp53-01-AP1"
45        g: "YTL378_JF552"
46        h: "MK022_cE9_1-01-Airyscan Processing-01-Scene-2-P1"
47        i: "beads_2023_05_04__19_00_22"
48        j: "20230511-p53-4x-CMV-1min-4h-01-Airyscan Processing-01"
49        k: "YTL1849A131_2023_05_04__13_36_36"
50    );
51}
ome_metadata/lib.rs

ome_metadata/
lib.rs
