Struct mzdata::spectrum::spectrum::CentroidSpectrum

pub struct CentroidSpectrum {
    pub description: SpectrumDescription,
    pub peaks: PeakSet,
}

Represents a spectrum that has been centroided

Fields

description: SpectrumDescription

The spectrum metadata describing acquisition conditions and details.

peaks: PeakSet

The picked centroid peaks

Implementations

impl CentroidSpectrum

pub fn into_spectrum(self) -> Result<Spectrum, SpectrumConversionError>

Convert a spectrum into a Spectrum

Trait Implementations

impl Clone for CentroidSpectrum

fn clone(&self) -> CentroidSpectrum

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for CentroidSpectrum

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for CentroidSpectrum

fn default() -> CentroidSpectrum

Returns the “default value” for a type.

impl<R: Read + Seek> RandomAccessScanIterator<CentroidSpectrum> for MGFReader<R>

fn start_from_id(&mut self, id: &str) -> Result<&Self, ScanAccessError>

fn start_from_index(&mut self, index: usize) -> Result<&Self, ScanAccessError>

fn start_from_time(&mut self, time: f64) -> Result<&Self, ScanAccessError>

impl<R: Read + Seek> ScanSource<CentroidSpectrum> for MGFReader<R>

fn get_spectrum_by_id(&mut self, id: &str) -> Option<CentroidSpectrum>

Retrieve a spectrum by it’s native ID

fn get_spectrum_by_index(&mut self, index: usize) -> Option<CentroidSpectrum>

Retrieve a spectrum by it’s integer index

fn reset(&mut self) -> &Self

Return the data stream to the beginning

fn get_index(&self) -> &OffsetIndex

fn len(&self) -> usize

Retrieve the number of spectra in source file

fn _offset_of_id(&self, id: &str) -> Option<u64>

fn _offset_of_index(&self, index: usize) -> Option<u64>

fn _offset_of_time(&mut self, time: f64) -> Option<u64>

fn get_spectrum_by_time(&mut self, time: f64) -> Option<S>

Retrieve a spectrum by its scan start time

fn iter(&mut self) -> ScanIterator<'_, Self, S>

impl<'lifespan> SpectrumBehavior for CentroidSpectrum

fn description(&self) -> &SpectrumDescription

The method to access the spectrum description itself, which supplies the data for most other methods on this trait.

fn peaks(&self) -> PeakDataLevel<'_>

Retrieve the most processed representation of the mass spectrum’s signal

fn acquisition(&self) -> &Acquisition

Access the acquisition information for this spectrum.

fn precursor(&self) -> Option<&Precursor>

Access the precursor information, if it exists.

fn start_time(&self) -> f64

A shortcut method to retrieve the scan start time of a spectrum.

fn ms_level(&self) -> u8

Access the MS exponentiation level

fn id(&self) -> &str

Access the native ID string for the spectrum

fn index(&self) -> usize

Access the index of the spectrum in the source file