Crate mzdata_param

Expand description

Elements of controlled vocabularies used to describe mass spectra and their components.

Directly maps to the usage of the PSI-MS controlled vocabulary in mzML

Macros§

curie: A syntactic shortcut for creating CURIE instances using compact notation
find_param_method: A helper to generate methods that find a value by a CURIE
impl_param_described: Implement the ParamDescribed trait for type $t, referencing a params member of type Vec<Param>.
impl_param_described_deferred: Implement the ParamDescribed trait for type $t, referencing a params member that is an Option<Vec<Param>> that will lazily be initialized automatically when it is accessed mutably.

AccessionCodeParseError
AccessionLike: Anything that can be converted into an accession code portion of a CURIE
CURIEParsingError
ControlledVocabulary: Controlled vocabularies used in mass spectrometry data files
ControlledVocabularyResolutionError: An error describing a failure to map a controlled vocabulary identifier to a known namespace
ParamValueParseError: Errors that might occur while trying to convert to a particular value type from whatever type might be stored in a ParamValue-like object.
Unit: Units that a term’s value might have
Value: An owned parameter value that may be a string, a number, or empty. It is intended to be paired with the ParamValue trait.
ValueRef: A borrowed parameter value that may be a string, a number, or empty. It is intended to be paired with the ParamValue trait.

ParamDescribed: A type that has a ParamList that uses Param instances to describe an entity with key-value pairs.
ParamDescribedRead: A read-only form of ParamDescribed
ParamLike: Describe a controlled vocabulary parameter or a user-defined parameter
ParamValue: Access a parameter’s value, with specific coercion rules and eager type conversion.