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Module col

Module col

Expand description

Builder functions sharing the textual parser’s typed IR.

Functions§

all: Every atom.
aromatic: Aromatic atoms.
backbone: Protein backbone atoms.
bfactor: Temperature-factor column.
by_residue: Whole residues containing target atoms.
chain: Chain identifier column.
glycans: Saccharide atoms.
heavy: Non-hydrogen atoms.
hetero: Heterogeneous atoms.
hydrogen: Hydrogen atoms.
ions: Ion atoms.
is_protein: Protein atoms.
ligands: Non-polymer ligand atoms.
lipids: Lipid atoms.
name: Atom name column.
none: No atoms.
nucleic: Nucleic-acid atoms.
nucleic_backbone: Nucleic-acid backbone atoms.
nucleic_base: Nucleic-acid base atoms.
nucleic_sugar: Nucleic-acid sugar atoms.
occupancy: Occupancy column.
polymer: Polymer atoms.
residues_within: Whole residues within radius of target.
resname: Residue name column.
sidechain: Protein side-chain atoms.
water: Water atoms.
within: Atoms within radius of target.
x: X coordinate.