List of all items
Structs
- adapters::dcd::DcdFrame
- adapters::dcd::DcdHeader
- adapters::dcd::DcdReader
- cif::dom::Block
- cif::dom::ColumnIter
- cif::dom::Columns
- cif::dom::Document
- cif::dom::Loop
- cif::dom::RowIter
- cif::extract::AtomSite
- cif::extract::CoordinateData
- cif::extract::Reflection
- cif::extract::ReflectionData
- cif::extract::UnitCell
- ffi::CoordsResult
- ops::bond_inference::InferredBond
- ops::transform::NamedResidueAtomSearch
- ops::transform::ResidueAtomSearch
- ops::validation::AtomCounts
- render::RenderBackboneResidue
- render::RenderCoords
- render::RenderSidechainAtom
- render::backbone::BackboneChain
- render::backbone::ProteinBackbone
- render::sidechain::SidechainAtomData
- render::sidechain::SidechainAtoms
- secondary_structure::BackboneResidue
- types::coords::AtomMetadata
- types::coords::ChainIdMapper
- types::coords::Coords
- types::coords::CoordsAtom
- types::coords::ResidueAtoms
- types::coords::ValidationResult
- types::density::DensityMap
- types::entity::Aabb
- types::entity::AtomSet
- types::entity::MoleculeEntity
- types::entity::NucleotideRing
- types::entity::PolymerChain
- types::entity::PolymerData
- types::entity::Residue
Enums
- cif::dom::Value
- cif::extract::CifContent
- cif::extract::ExtractionError
- cif::parse::CifParseError
- ops::bond_inference::BondOrder
- secondary_structure::DetectionInput
- secondary_structure::SSType
- types::coords::CoordsError
- types::density::DensityError
- types::element::Element
- types::entity::EntityKind
- types::entity::MoleculeType
Functions
- adapters::bcif::bcif_file_to_coords
- adapters::bcif::bcif_file_to_entities
- adapters::bcif::bcif_to_coords
- adapters::bcif::bcif_to_entities
- adapters::dcd::dcd_file_to_frames
- adapters::mrc::mrc_file_to_density
- adapters::mrc::mrc_to_density
- adapters::pdb::coords_to_pdb
- adapters::pdb::mmcif_file_to_coords
- adapters::pdb::mmcif_file_to_entities
- adapters::pdb::mmcif_str_to_coords
- adapters::pdb::mmcif_str_to_entities
- adapters::pdb::mmcif_to_coords
- adapters::pdb::pdb_file_to_coords
- adapters::pdb::pdb_file_to_entities
- adapters::pdb::pdb_str_to_coords
- adapters::pdb::pdb_str_to_entities
- adapters::pdb::pdb_to_coords
- adapters::pdb::structure_file_to_coords
- adapters::pdb::structure_file_to_entities
- cif::parse::parse
- ffi::coords_free_result
- ffi::coords_free_string
- ffi::coords_from_backbone
- ffi::coords_from_coords
- ffi::coords_to_pdb
- ffi::pdb_to_coords_bytes
- ops::bond_inference::infer_bonds
- ops::transform::align_coords_bytes
- ops::transform::align_to_reference
- ops::transform::backbone_only
- ops::transform::build_ca_position_map
- ops::transform::centroid
- ops::transform::extract_backbone_chains
- ops::transform::extract_ca_from_chains
- ops::transform::extract_ca_positions
- ops::transform::filter_atoms
- ops::transform::filter_residues
- ops::transform::get_atom_by_name
- ops::transform::get_atom_position
- ops::transform::get_backbone_atoms_from_chains
- ops::transform::get_ca_for_residue
- ops::transform::get_ca_position_from_chains
- ops::transform::get_closest_atom_for_residue
- ops::transform::get_closest_atom_with_name
- ops::transform::get_closest_backbone_atom
- ops::transform::heavy_atoms_only
- ops::transform::interpolate_coords
- ops::transform::interpolate_coords_collapse
- ops::transform::kabsch_alignment
- ops::transform::kabsch_alignment_with_scale
- ops::transform::protein_only
- ops::transform::set_atom_position
- ops::transform::transform_coords
- ops::transform::transform_coords_with_scale
- ops::validation::atom_counts
- ops::validation::atoms_by_residue
- ops::validation::backbone_atoms
- ops::validation::completeness_report
- ops::validation::expected_heavy_atoms
- ops::validation::has_complete_backbone
- ops::validation::validate_completeness
- render::backbone::ca_positions_from_chains
- render::extract_sequences
- render::gpu::to_atom_metadata
- render::gpu::to_positions_f32
- render::gpu::to_positions_flat
- secondary_structure::auto::detect
- secondary_structure::dssp::detect
- secondary_structure::dssp::from_string
- secondary_structure::merge_short_segments
- secondary_structure::resolve
- types::assembly::assembly_bytes
- types::assembly::ca_positions
- types::assembly::protein_coords
- types::assembly::residue_count
- types::assembly::update_protein_entities
- types::coords::atom_count
- types::coords::deserialize
- types::coords::deserialize_assembly
- types::coords::serialize
- types::coords::serialize_assembly
- types::entity::classify_residue
- types::entity::coords_to_entity_kind
- types::entity::extract_by_type
- types::entity::merge_entities
- types::entity::split_into_entities