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  • mm2-0.2.3
    • mm2 0.2.3
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    • keithyin
    • Dependencies
      • anyhow ^1.0.82 normal
      • bio ^1.6.0 normal
      • clap ^4.4 normal
      • crossbeam ^0.8 normal
      • glob ^0.3.1 normal
      • indicatif ^0.17.7 normal
      • lazy_static ^1.4.0 normal
      • minimap2 ^0.1.20 normal
      • num_cpus ^1.16 normal
      • rayon ^1.8.1 normal
      • rust-htslib ^0.47.0 normal
      • time ^0.3.34 normal
      • tracing ^0.1.40 normal
      • tracing-subscriber ^0.3.18 normal
      • uuid ^1.0 normal
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    • 5.97% of the crate is documented
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    • x86_64-unknown-linux-gnu
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mm20.2.3

  • All Items

Crate Items

  • Modules
  • Structs
  • Functions

Crate mm2

Source

Modules§

  • bam_record_ext
  • cli
  • dna
  • fille_reader
  • pb_tools
  • samtools

Structs§

  • SingleQueryAlignResult

Functions§

  • align_single_query_to_targets
  • align_worker
  • build_aligner
  • build_bam_record_from_mapping
  • convert_mapping_cigar_to_record_cigar
  • query_seq_sender
  • set_primary_alignment
  • targets_to_targetsidx
    {“target_name”: (idx, length)}
  • write_bam_worker
    targetidx: &HashMap<target_name, (idx, target_len)>