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mb_map_batch

Function mb_map_batch 

Source
pub unsafe extern "C" fn mb_map_batch(
    opt: *const mb_opt_t,
    idx: *const mb_idx_t,
    n_seq: i32,
    qlen: *const i32,
    seq: *mut *const c_char,
    n_hit: *mut i32,
    b: *mut mb_tbuf_t,
    qname: *mut *const c_char,
) -> *mut *mut mb_hit_t
Expand description

Align a set of sequences in batch

@param opt options, typically initialized by mb_opt_init() @param idx index @param n_seq number of sequences @param qlen query lengths, of size n_seq @param seq query sequences, ASCII or 01/2/3 encoded, of size n_seq @param n_hit (out) number of hits, of size n_seq @param b thread buffer; can be NULL @param qname query name, of size n_seq

@return hits, of size n_seq