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  • matchtigs-1.3.2
    • matchtigs 1.3.2
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    • sebschmi
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      • atomic-counter ^1.0.1 normal
      • clap ^4.0.17 normal
      • crossbeam ^0.8.1 normal
      • disjoint-sets ^0.4.2 normal
      • flate2 ^1.0.24 normal
      • genome-graph ^5.0.0 normal
      • hashbrown ^0.12.0 normal
      • itertools ^0.10.3 normal
      • log ^0.4.14 normal
      • memory-stats ^1.0.0 normal
      • permutation ^0.4.0 normal
      • simplelog ^0.12.0 normal
      • traitgraph-algo ^5.3.0 normal
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Crate libmatchtigs

  • Structs
  • Enums
  • Traits
  • Functions
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Structs

  • EulertigAlgorithm
  • EulertigAlgorithmConfiguration
  • GreedytigAlgorithm
  • GreedytigAlgorithmConfiguration
  • MatchtigAlgorithm
  • MatchtigAlgorithmConfiguration
  • PathtigAlgorithm

Enums

  • HeapType
  • NodeWeightArrayType

Traits

  • TigAlgorithm

Functions

  • clib::matchtigs_build_graph
  • clib::matchtigs_compute_tigs
  • clib::matchtigs_initialise
  • clib::matchtigs_initialise_graph
  • clib::matchtigs_merge_nodes
  • write_duplication_bitvector
  • write_duplication_bitvector_to_file