Module uniprobe

Source
Expand description

Parser implementation for matrices in UniPROBE format.

The UniPROBE database stores DNA-binding sites as Position-Weight Matrices.

The UniPROBE files contains a metadata line for each matrix, followed by one line per symbol storing tab-separated scores for the column:

Motif XYZ
A:	0.179	0.210	0.182	0.25
C:	0.268	0.218	0.213	0.25
G:	0.383	0.352	0.340	0.25
T:	0.383	0.352	0.340	0.25

Structs§

Reader
Record

Functions§

read