Module libsais64 

Extension of the library for inputs larger or equal to 2GB (2147483648 bytes).

Constants

LIBSAIS64_VERSION_MAJOR

LIBSAIS64_VERSION_MINOR

LIBSAIS64_VERSION_PATCH

LIBSAIS64_VERSION_STRING

Functions

libsais64^⚠

Constructs the suffix array of a given string.

libsais64_bwt^⚠

Constructs the burrows-wheeler transformed string (BWT) of a given string.

libsais64_bwt_aux^⚠

Constructs the burrows-wheeler transformed string (BWT) of a given string with auxiliary indexes.

libsais64_bwt_aux_omp^⚠

Constructs the burrows-wheeler transformed string (BWT) of a given string with auxiliary indexes in parallel using OpenMP.

libsais64_bwt_omp^⚠

Constructs the burrows-wheeler transformed string (BWT) of a given string in parallel using OpenMP.

libsais64_gsa^⚠

Constructs the generalized suffix array (GSA) of given string set.

libsais64_gsa_omp^⚠

Constructs the generalized suffix array (GSA) of given string set in parallel using OpenMP.

libsais64_lcp^⚠

Constructs the longest common prefix array (LCP) of a given permuted longest common prefix array (PLCP) and a suffix array.

libsais64_lcp_omp^⚠

Constructs the longest common prefix array (LCP) of a given permuted longest common prefix array (PLCP) and a suffix array in parallel using OpenMP.

libsais64_long^⚠

Constructs the suffix array of a given integer array.Note, during construction input array will be modified, but restored at the end if no errors occurred.

libsais64_long_omp^⚠

Constructs the suffix array of a given integer array in parallel using OpenMP.Note, during construction input array will be modified, but restored at the end if no errors occurred.

libsais64_omp^⚠

Constructs the suffix array of a given string in parallel using OpenMP.

libsais64_plcp^⚠

Constructs the permuted longest common prefix array (PLCP) of a given string and a suffix array.

libsais64_plcp_gsa^⚠

Constructs the permuted longest common prefix array (PLCP) of a given string set and a generalized suffix array (GSA).

libsais64_plcp_gsa_omp^⚠

Constructs the permuted longest common prefix array (PLCP) of a given string set and a generalized suffix array (GSA) in parallel using OpenMP.

libsais64_plcp_omp^⚠

Constructs the permuted longest common prefix array (PLCP) of a given string and a suffix array in parallel using OpenMP.

libsais64_unbwt^⚠

Constructs the original string from a given burrows-wheeler transformed string (BWT) with primary index.

libsais64_unbwt_aux^⚠

Constructs the original string from a given burrows-wheeler transformed string (BWT) with auxiliary indexes.

libsais64_unbwt_aux_omp^⚠

Constructs the original string from a given burrows-wheeler transformed string (BWT) with auxiliary indexes in parallel using OpenMP.

libsais64_unbwt_omp^⚠

Constructs the original string from a given burrows-wheeler transformed string (BWT) with primary index in parallel using OpenMP.