List of all items

Structs

• BarcodeLookupMap
• GlobalEqCellList
• TempBucket
• chunk::AlevinFryChunkContext
• chunk::Chunk
• chunk::ChunkBuf
• chunk::ChunkConfig
• chunk::ChunkConfigAtac
• chunk::CorrectedCbChunk
• collation::CollationManifest
• collation::SampleGroup
• header::RadHeader
• header::RadPrelude
• io::NewI128
• io::NewI16
• io::NewI32
• io::NewI64
• io::NewI8
• io::NewU128
• io::NewU16
• io::NewU32
• io::NewU64
• io::NewU8
• io::TryWrapper
• rad_types::TagDesc
• rad_types::TagMap
• rad_types::TagSection
• rad_types::TagViewMap
• readers::MetaChunk
• readers::MetaChunkIterator
• readers::ParallelChunkReader
• readers::ParallelRadReader
• record::AlevinFryReadRecordHeader
• record::AlevinFryReadRecordT
• record::AlevinFryReadRecordWithPositionT
• record::AlevinFryRecordContext
• record::AtacSeqReadRecord
• record::AtacSeqReadRecordHeader
• record::AtacSeqRecordContext
• record::GenericReadRecord
• record::GenericReadRecordContext
• record::MultiBarcodeReadRecordHeader
• record::MultiBarcodeReadRecordT
• record::MultiBarcodeRecordContext
• record::PiscemBulkReadRecord
• record::PiscemBulkRecordContext
• record::ScLongReadRecordContext
• record::ScLongReadRecordHeader
• record::ScLongReadRecordT
• schema::ProtocolInfo
• schema::TempCellInfo
• unmapped::UnmappedBcFormat
• unmapped::UnmappedBcRecordReader
• unmapped::UnmappedBcRecordWriter
• writers::ConcurrentChunkWriter
• writers::RadFileWriter

Enums

• codec::ChunkCodec
• collation::BarcodeRole
• rad_types::MappedFragmentOrientation
• rad_types::MappingType
• rad_types::RadAtomicId
• rad_types::RadFloatId
• rad_types::RadIntId
• rad_types::RadType
• rad_types::TagSectionLabel
• rad_types::TagValue
• schema::CollateKey
• unmapped::CollatedUnmappedCounts

Traits

• chunk::ChunkContext
• rad_types::PrimitiveInteger
• rad_types::PrimitiveSignedInteger
• rad_types::PrimitiveUnsignedInteger
• record::CollatableMappedRecord
• record::CollatableRecordHeader
• record::ConvertiblePrimitiveInteger
• record::HierarchicallyCollatable
• record::KnownSize
• record::MappedRecord
• record::RecordContext
• record::RecordHeader
• record::UmiTaggedRecord

Macros

• as_i128
• as_i64
• as_u128
• as_u64
• tag_value_try_into_int
• try_as_i128
• try_as_i64
• try_as_u128
• try_as_u64
• u8_to_vec_of
• u8_to_vec_of_bool
• write_tag_value_array

Derive Macros

• UmiTagged

Functions

• as_u8_slice
• as_u8_slice_u16
• as_u8_slice_u8
• codec::compress_payload
• codec::decompress_payload
• collate_temporary_bucket_twopass
• collate_temporary_bucket_twopass_atac
• collate_temporary_bucket_twopass_generic
• dump_corrected_cb_chunk_to_temp_file
• dump_corrected_cb_chunk_to_temp_file_atac
• dump_corrected_cb_chunk_to_temp_file_generic
• io::read_into
• io::read_into_i128
• io::read_into_i64
• io::read_into_u128
• io::read_into_u64
• io::try_read_into
• io::try_read_into_i128
• io::try_read_into_i64
• io::try_read_into_u128
• io::try_read_into_u64
• io::write_str_bin
• lib_name
• rad_types::decode_int_type_tag
• rad_types::encode_type_tag
• rad_types::get_tag_by_name
• utils::has_data_left
• utils::read_chunk_header

Type Aliases

• record::AlevinFryReadRecord
• record::AlevinFryReadRecordU128
• record::AlevinFryReadRecordU64
• record::AlevinFryReadRecordWithPosition
• record::AlevinFryReadRecordWithPositionU128
• record::AlevinFryReadRecordWithPositionU64
• record::MultiBarcodeReadRecord
• record::MultiBarcodeReadRecordU128
• record::MultiBarcodeReadRecordU64
• record::ScLongReadRecord
• record::ScLongReadRecordU128
• record::ScLongReadRecordU64

Statics

• exit_codes::EXIT_UNSUPPORTED_TAG_TYPE

Constants

• codec::CHUNK_CODEC_TAG
• readers::EMPTY_METACHUNK_CALLBACK
• record::MAX_INLINE_BARCODES
• unmapped::UNMAPPED_BC_FORMAT_VERSION
• utils::MASK_LOWER_31_U32
• utils::MASK_TOP_BIT_U32
• utils::SPLICE_MASK_U32