Crate libparasail_sys
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§Introduction
libparasail-sys is a Rust crate that provides FFI bindings to parasail, a SIMD C library for pairwise sequence alignment. Safe Rust bindings are planned and will be provided as a seperate crate in the future.
For mor information on parasail, see the original C library documentation.
Structs§
Constants§
Statics§
Functions§
- feof⚠
- getc⚠
- getw⚠
- Convert CIGAR array into a character array.
- Extract length of a CIGAR operation from CIGAR 32-bit unsigned integer.
- Extract CIGAR operation character from CIGAR 32-bit unsigned integer.
- Produce CIGAR 32-bit unsigned integer from CIGAR operation and CIGAR length.
- Produce CIGAR 32-bit unsigned integer array from CIGAR string.
- Lookup function by name.
- Lookup function info by name.
- Lookup pcreator by name.
- Lookup pfunction by name.
- Lookup function info by name.
- Converts a matrix into pssm matrix.
- Copy any matrix into writeable matrix.
- Create simple substitution matrix.
- Create simple substitution matrix.
- Deallocate substitution matrix.
- Create substitution matrix from a filename.
- Create substitution matrix from a filename.
- Lookup substitution matrix by name.
- Create pssm substitution matrix.
- Create pssm substitution matrix.
- Modify a user matrix.
- Deallocate result.
- Current time in seconds with nanosecond resolution.
- putc⚠
- puts⚠
- putw⚠