Modules§
- alignment
- Representation of an alignment.
- anchors
- chain_
align - chaining_
cost_ function - chaining_
lower_ bounds - Compute lower bounds for chaining anchors with gaps.
- costs
- exact_
chaining - Fill the gap between two chained anchors with an optimal alignment.
- panic_
on_ extend
Functions§
- align
- Align two sequences.
- dna_
rc_ fn - A reverse complement function for DNA alphabets.
- preprocess
- Perform preprocessing for tschainalign.