Struct hpo::similarity::defaults::InformationCoefficient

pub struct InformationCoefficient { /* private fields */ }

Information Coefficient Similarity score from Li

For a detailed description see Li B, et. al., arXiv, (2010)

Implementations

impl InformationCoefficient

pub fn new(kind: InformationContentKind) -> Self

Constructs a new struct to calculate the Jiang & Conrath based similarity scores between two terms

Examples

use hpo::similarity::InformationCoefficient;
use hpo::term::InformationContentKind;

// use Omim-based InformationContent for similarity calculation
let ic = InformationCoefficient::new(InformationContentKind::Omim);

Trait Implementations

impl Debug for InformationCoefficient

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Similarity for InformationCoefficient

fn calculate(&self, a: &HpoTerm<'_>, b: &HpoTerm<'_>) -> f32

calculates the actual similarity between term a and term b