Expand description
gtf_splice_index
Pure-Rust, BAM-independent splice matching library. This crate models transcripts/genes and matches spliced reads represented as genomic blocks (0-based, half-open).
Re-exports§
pub use index::IdNameKeys;pub use index::SpliceIndex;pub use annotation::AnnotationBuilder;pub use types::RefBlock;pub use types::SplicedRead;pub use types::Strand;pub use model::transcript::Transcript;pub use model::gene::Gene;pub use model::types::GeneId;pub use model::types::TranscriptId;pub use model::MatchClass;pub use model::MatchOptions;pub use model::OverhangClass;