1mod file;
2mod genome;
3mod ioutils;
4
5pub mod algorithm;
6pub mod const_bag;
7pub mod property;
8pub mod record;
9
10pub use file::LineRecordStreamExt;
11pub use genome::{ChrRef, Genome};
12
13pub use itertools::Itertools;
14
15pub mod prelude {}
16
17#[cfg(test)]
18mod test {
19 use crate::Genome;
20
21 #[test]
22 fn test_genome_storage() {
23 Genome::clear_genome_definition();
24 let id = Genome::query_chr("chr1").get_id_or_update();
25 assert_eq!(id, 0);
26 assert_eq!(Genome::query_chr("chr1").id(), Some(0));
27 assert_eq!(Genome::query_chr("chr1").verify_size_or_update(100), true);
28 assert_ne!(Genome::query_chr("chr1").verify_size_or_update(200), true);
29 assert_eq!(Genome::query_chr("chr1").get_chr_size(), Some(100));
30 assert_eq!(Genome::query_chr("chr1").to_string(), "chr1");
31 }
32}