Structs§
- Output
Args - String
Functional Annotation Args - Gets the functional annotation (Gene Ontology, UniProt Keywords, PFAM, INTERPRO and SMART domains) of your list of proteins.
- String
Functional Annotation Args Builder - Use builder syntax to set the inputs and finish with
build()
. - String
Functional Enrichment Args - Performs the enrichment analysis of your set of proteins for the Gene Ontology, KEGG pathways, UniProt Keywords, PubMed publications, Pfam, InterPro and SMART domains.
- String
Functional Enrichment Args Builder - Use builder syntax to set the inputs and finish with
build()
. - String
Homology Args - String
Homology Args Builder - Use builder syntax to set the inputs and finish with
build()
. - String
Interactions Args - Gets all the STRING interaction partners of your proteins
- String
Interactions Args Builder - Use builder syntax to set the inputs and finish with
build()
. - String
Mapping Args - String
Mapping Args Builder - Use builder syntax to set the inputs and finish with
build()
. - String
Network Args - Retrieves the network interactions for your input protein(s) in various text based formats
- String
Network Args Builder - Use builder syntax to set the inputs and finish with
build()
. - String
PpiEnrichment Args - Tests if your network has more interactions than expected
- String
PpiEnrichment Args Builder - Use builder syntax to set the inputs and finish with
build()
.
Enums§
Functions§
- launch_
string_ annotations - launch_
string_ enrichment - launch_
string_ homology - launch_
string_ interactions - launch_
string_ mapping - launch_
string_ network - launch_
string_ ppi_ enrichment - match_
output - Match the output to either a file or stdout
- string_
annotations - string_
enrichment - string_
homology - string_
interactions - string_
mapping - string_
network - string_
ppi_ enrichment - write_
dataframe