Crate fxsplit 

Core module for splitting a .fa/.fq file into chunks Alejandro Gonzales-Irribarren, 2025

This module contains the main function for splitting .fa/.fq files based on custom requirements in parallel.

In short, the module accepts any type of .fa or .fq file and process the reads or sequences inside them in parallel when is possible. Compressed files are also accepted. The user has the ability to specify is the splitting process should be done based on specific chunk sizes or number of files, and the amount of parallelization that should be used in the process.

Modules

cli

Core module for splitting a .fa/.fq file into chunks Alejandro Gonzales-Irribarren, 2025

Macros

dispatch

Dispatches file processing based on its suffix.

Structs

ChunkRegion

Region [iso-split]

Enums

SplitMode

Split mode

Functions

lib_iso_split

Splits large sequencing files (FASTA, FASTQ, gzipped versions) into smaller chunks or files.

split_fa

Splits a non-gzipped FASTA file into multiple smaller FASTA files.

split_fa_gz

Splits a gzipped FASTA file (.fa.gz or .fasta.gz) into multiple smaller gzipped FASTA files.

split_fq

Splits a gzipped FASTQ file (.fq.gz or .fastq.gz) into multiple smaller gzipped FASTQ files.