Crate flow_plots 

flow-plots

A library for creating visualizations of flow cytometry data.

Overview

This library provides a flexible, extensible API for creating different types of plots from flow cytometry data. The architecture is designed to be easily extended with new plot types.

Basic Usage

use flow_plots::{DensityPlot, DensityPlotOptions, Plot};
use flow_plots::options::BasePlotOptions;
use flow_plots::render::RenderConfig;

let plot = DensityPlot::new();
let options = DensityPlotOptions::new()
    .base(BasePlotOptions::new().width(800u32).height(600u32).build()?)
    .build()?;
let data: Vec<(f32, f32)> = vec![(100.0, 200.0)];
let mut render_config = RenderConfig::default();
let bytes = plot.render(data.into(), &options, &mut render_config)?;

Architecture

The library is organized into several modules:

• options: Plot configuration types using the builder pattern
• plots: Plot implementations (currently DensityPlot)
• render: Rendering infrastructure and progress reporting
• density: Density calculation algorithms
• colormap: Color map implementations
• helpers: Helper functions for common initialization patterns

Re-exports

pub use colormap::ColorMaps;

pub use histogram_data::HistogramData;

pub use histogram_data::HistogramDataError;

pub use histogram_data::HistogramSeries;

pub use options::AxisOptions;

pub use options::BasePlotOptions;

pub use options::DensityPlotOptions;

pub use options::HistogramPlotOptions;

pub use options::PlotOptions;

pub use options::SpectralSignaturePlotOptions;

pub use plots::DensityPlot;

pub use plots::HistogramPlot;

pub use plots::Plot;

pub use plots::PlotType;

pub use plots::SpectralSignaturePlot;

pub use scatter_data::ScatterDataError;

pub use scatter_data::ScatterPlotData;

pub use render::ProgressCallback;

pub use render::ProgressInfo;

pub use render::RenderConfig;

pub use signal_heatmap::generate_normalized_spectral_signature_plot;

pub use signal_heatmap::generate_signal_heatmap;

Modules

colormap

contour

Contour plot calculation using KDE2D and marching squares.

density_calc

helpers

histogram_data

Histogram data types supporting raw values, pre-binned data, and overlaid series.

options

plots

render

scatter_data

Scatter plot data types supporting simple, gate-colored, and z-axis colored plots.

signal_heatmap

Signal heatmap and normalized spectral signature plot generation

Functions

create_axis_specs

@deprecated The old PlotOptions struct has been removed. Use DensityPlotOptions with builder pattern instead.

get_percentile_bounds

Calculate percentile bounds for a dataset

Type Aliases

PlotBytes

PlotRange